nxph2b (nxph2b,LOC107686003,LOC107551792,LOC107715780,LOC107572939,LOC107687746,LOC107718217)


Basic Information

Item Value
gene id nxph2b
gene name nxph2b,LOC107686003,LOC107551792,LOC107715780,LOC107572939,LOC107687746,LOC107718217
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 9785040 ~ 9790626 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252275.1
CTGCCAGCTTAGCGTTTTGACATGAGTCTTGTGCATAGTGCAGAGCTTCCCGTTTAATTTAGATGCAGCTATTTATTCATGTTCACGTGAacaatttgaattaataaagaTTATTAGACAGCTGTTAGCTCTGTTTTATAACCCGTCCTGGCATTTCTCTGATACCTGTGGAGGTTGTGGCGAATAGACTAGAATAGAAAAGGTAAAAAGTTTTGAGTCACCCCTCTAAAACGTTTAttgtaaaacctttttatatttaaaatagtttgaattCTATCCAAACCAAATATTTTGTCAAAGCTGTTGACAATAATACTACACTTGAGGTAGATAAGGGTCAACTATATTATGAAGGGACcttttaattagtgttttttcatactatttattgtgtgtatgtattattattattattttggcatTCACTGTTATTTAGACTACCCTGAAAATATTCCAGTATAAAAGAAAGCTTATGATAATATGAAAACCTAAAgatgtgctttattttttgcagaCTCTCATGGCGATAAAATGCTTCCGAATAGCAGTTTTGTCTCAAAAATATAAACTCTGCCCGCGAGGCAAGTCTTCTTGCTGTTTTATGAGCCATCGAAGTGCTTCTTAGCACCAAGTTAACACGCGGTGGTTTTAAATGGctttacatacataaaaaaaaagctttaaagtgTGATGTGTGCTGTTATTGGTGCTGATGTTGAGGGGTTGGGCTCAGCGACTCCACTGTCACAACCCAAAAGCGCACCGATCCATCACACAACATCAGTTTAGGAAGAGCGAGCGGGCAAGGATGCAGCAAAACCGGACTTCTAACCAGGGGACTGCTTAAAGAGCAGTTTTATtatcgtttttttcttttgggtgGACAATCGCATCCACGCATAATCGTGTTAGGATATGCGAGTGTTGCAGAGGAAAGGCGCGCAGCCAGATGAGCAGAGCTAAGAGGATTTAATGCAGCTGGACACGAGCCGCGCTGAGTAAAGAAGAagattatattgttttaatcaaatgcGAAGAAGTTTTTATTGCTGCTCACTTTGAGTTTGAACTGTCGAGGAGTGATGTTTGTCTTGAAGCACTACGATAACTACGCTGTAAGGATGCTCGCCGCGCAGAGATGCACGGGTCCAACTCTACAGTAAAAGGgaaTACTGACAGAAGACCTTGCCACGAGTCGACCTGATCTTTGCCAAGCCAGATCTGGACTCtaaaaaacccccccaaaaaacacatGAAGATGTGCCAGTGTTACTCTGCCCTGCTTATGGTCTGTTTACACATgGTGACATGTGGAGCAGAGCTCAGAGCAGCTGTGTCTCCTCTTGGTTGGGGAGAGAGCGATAAGGAGGAAAGTGTCTCTCCTTACGGCTTTCGTTCAGGGATTCTCAAATCCCTGCGGCTTTTCTCCCACACGTCCCAATCTAACAGCCAGAGCCGTGAAACTGCTCCAGGTCCCGGGGCACTGGATCTGTGGGCCTGGTTATCCAACCACACTGATACCGAAGGAACCCTCTCGAGGGCCAAACGTCGCCCCTATGTGAAAACGGGCAAGTTTAAGAAGATGTTTGGCTGGGGCGACTTCCATTCGAACATCAAAACGGTCAAGCTAAACCTTCTGATTACTGGGAAGATCGTTGACCATGGCAACGGAACCTTTAGCGTCTATTTCCGCCACAACTCCACCGGCTTGGGCAACGTGTCCGTCAGCCTGGTCCCGCCCTCCAAGGCCGTCGATTTTGAGATCACTCAACAGGAGACCATAGAGGTGCCCAAAGACCATAAGGCCTTCAATTGTCGAGTGGAATATGAGAAGACGGACCGCAGCAAGAGGACGTCCGTTTGCAGCGACTTCCCGAACAGGGTATGTTTCCAGGAACAGACCCAAAGCCATGTGTCTTGGCTTTGCTCCAAGCCCTTCAAGGTCATCTGCATCTACATTGACTTCTTCAGTGCTGACTATAAGCTAGTACAGAAGGTCTGCCCAGACTACAACTACCACAGTGACACTCCCTATACCTCTGTGGGATAGCACAGCCTGGATTGGATGTGTCGATGAGGTGTCATCTCGATGTTACAGCCTGTCTAGCCTGTAGTTTCCTTGTTCTTCTGTTCCATAAAGAACTGGATGAATGGAAACAAAGATCGGATGAGGAACCACTCTTTTGATTCTATCCCACTCGTCCTCTTAGGGCAGTCGATgacaggaatagttcacccaaaaaagaaattttccacagaaaaaaaatctgtcaacaAAATGAGGAGttaaggactttttttttttttttttttttttttgggtgaatccAGGCTTAAGACCTGATTTCCTGACGGCTGTTTCTTGTGTTTGACATTTAGATTGGACAAGACCACATCTATGGTTTCCACAGTGACCCCCGACCCTTTCTCAGTGATTCTTGTGACGTCATCAGTGTGAAGTTTTAAATTTTCCTAAATGAATTTCCCAATCAACTTAAGCTGGGATTcaagaacagaacaaaaaaaaaaaaaaaaaagtaaaacatctcGTATTGCAGCCATTTGTGATGCCCTCCTTTTCATTCCAGCATATTTTTGTGTTCACAGAAACATTGTCAGTAACTAAGATTAATGTTAAAGCCATAATGTGCTCCTCGGTTCTTctgaattttgtttttttcggtTATTAAAGAAAAGACTAGATTTAAATTTC

Function

symbol description
nxph2b Predicted to enable signaling receptor binding activity. Predicted to be located in extracellular region. Orthologous to human NXPH2 (neurexophilin 2).

NR:

description
PREDICTED: neurexophilin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252275.1 True 2713 mRNA 0.43 3 9785040 9790626

Neighbor

gene id symbol gene type direction distance location
si:ch211-227n13.3 NA coding upstream 135 9781131 ~ 9784905 (+)
phka2 phka2,LOC107718215,LOC107715813,LOC107685996,LOC107677496,LOC107573346 coding upstream 4301 9765169 ~ 9780739 (+)
col6a2 col6a2,LOC107573124,LOC107715814,LOC107677497,LOC107685953,LOC107718216 coding upstream 20346 9750877 ~ 9764694 (+)
col6a1 col6a1,LOC107715812,LOC107677507,LOC107685955,LOC107718214,LOC107551781 coding upstream 44902 9710265 ~ 9740138 (+)
tdo2b tdo2b,tdo2,LOC107718213,LOC107715811,LOC107551803,LOC107685956,LOC107573507 coding upstream 84810 9696275 ~ 9700230 (+)
lims1 lims1,LOC107687747,LOC107715819,LOC107572539,LOC104918652 coding downstream 79628 9870254 ~ 9879207 (+)
rab11a rab11a,LOC105007892,LOC106591986,LOC100698633,LOC106588008,LOC103378951,LOC106562755 coding downstream 469072 10259698 ~ 10265685 (+)
LOC122354282 gmfb,LOC107705437,LOC107553212,LOC107602964,LOC102779377 coding downstream 920822 10711448 ~ 10715250 (+)
LOC122354281 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding downstream 925903 10716529 ~ 10721599 (+)
LOC122354278 LOC107654948,LOC107705440,LOC107736540,LOC107682154,LOC100538248 coding downstream 935525 10726151 ~ 10734638 (+)
G80347 NA non-coding upstream 191229 9593255 ~ 9593811 (+)
G80346 NA non-coding upstream 192828 9591978 ~ 9592212 (+)
G80344 NA non-coding upstream 197579 9587200 ~ 9587461 (+)
G80343 NA non-coding upstream 198588 9586210 ~ 9586452 (+)
G80341 NA non-coding upstream 201853 9582750 ~ 9583187 (+)
G80523 NA non-coding downstream 294728 10085354 ~ 10091837 (+)
G80531 dennd4a,LOC107596978 non-coding downstream 449219 10239845 ~ 10243421 (+)
G80525 NA non-coding downstream 453242 10243868 ~ 10244071 (+)
G80509 NA non-coding downstream 531044 10321670 ~ 10322338 (+)
G80511 NA non-coding downstream 535024 10325650 ~ 10331888 (+)
pik3ca pik3ca,LOC107574159,LOC107685965 other upstream 244919 9521798 ~ 9540121 (+)
chchd4a chchd4a,chchd4,LOC107574929,LOC107715767 other upstream 359738 9422950 ~ 9425302 (+)
itpr1b itpr1,LOC107685975,LOC107659525 other upstream 805799 8891450 ~ 8979241 (+)
setmar setmar,LOC107686011,LOC107718240,LOC107659535 other upstream 903384 8879583 ~ 8881656 (+)
brk1 brk1,BRK1,LOC106565571 other upstream 906052 8875288 ~ 8878988 (+)
G80551 LOC107659525,LOC107581741,LOC107718227,LOC107685975,LOC107573079,LOC103355429 other downstream 675996 10466622 ~ 10471187 (+)
G80638 NA other downstream 850506 10641132 ~ 10661970 (+)
G80761 NA other downstream 1431721 11222347 ~ 11226622 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other downstream 1715027 11505653 ~ 11507771 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other downstream 1734397 11525023 ~ 11527042 (+)

Expression


Co-expression Network