camk1b (LOC107714490,LOC107566450,LOC107680448,LOC107572399)


Basic Information

Item Value
gene id camk1b
gene name LOC107714490,LOC107566450,LOC107680448,LOC107572399
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2996499 ~ 3037108 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252372.1
GACTGGGTCAGCCGGAGGAAGCGGCAGTCAGATCTCCGCGAGACCAGCGCGAGCGCACCGCGTTCAGATTACAGCCGGAGACGCGCCTCTGCACCTCTGCGATACACAGCCATGGGAAACCAtTTCTCCAACATTGACCGTAGCAAAATGCCATTGGGAGAGGATGGACACtcttggaaaaagaaaacatcgaACATCAAGGACATCTATGACTTTAAAGAAGTTTTGGGAACAGGGGCTTTTTCTGAGGTGATGCTCGCAGAGGAGAAGAGGACAAGAAAACTAGTGGCGATAAAATGCATCCCGAAAAAAGCTCTGGAGGGGAAAGAGAACAGCATTGAAAATGAGATCGCCGTGCTCCACAAGATTAAACATGCCAACATAGTTTCTTTGGAGGACATCTATGAGAGTAAATCACACCTCTACCTTGTCATGCAACTAGTGTCCGGTGGTGAGCTCTTCGACAGGATTGTGGAAAAAGGATTTTACACGGAGAAGGATGCCAGTAAGCTCATCCAGCAGATCCTGGATGCTGTGAAGTACCTGCATGACATGGGCATTGTGCACAGAGACCTGAAGCCAGAGAACCTTCTGTACTACAGTATGGATGAAGACTCCAAAATCATGATCAGTGATTTTGGCCTGTCAAAGATTGAGGGTTCAGGTAGTGTGATGAGCACAGCGTGCGGCACCCCTGGATATGTAGCTCCTGAGGTTTTGGCACAGAAGCCGTATAGTAAAGCAGTGGACTGTTGGTCAATCGGGGTCATCGCTTACATTCTTTTATGTGGCTATCCACCATTTTACGATGAGAATGATGCCAAGCTCTTTGAGCAGATCCTGAAGGCAGAGTACGAGTTTGATTCACCGTACTGGGATGATATCTCTGACTCAGCCAAagattttattgtgcatttaatgGAAAAAGATCCCAGCCAGCGTTACACGTGCGAACAGGCTCTTCAGCACCCATGGATTGCTGGAGACACGGCGTTGGATAAGAATATACATGAATCTGTCAGTGCCCAAATTAAGAAGAACTTTGCCAAAAGCAAGTGGAAGCAAGCATTTAATGCCACAGCAGTAGTTCGTCACATGCGAAGGCTGCAGTTGGGAACCAGTCAGGAGGGCCAAACTCAGTCCACCCTGCCCAGTCCCTGCCACGGGCACCTGCTGCTGCCTGAGGGGGACGAGGAAGAGAGCTCCCTGCGTAGGGAAAATAGTGGCTGTTCTGAGGGTGTCAGTGATGAAAATGACATTCAGAACTGCACCTACCACGTCCATCCTACTAGTCGGGTCTGAGTGTCAATCATCCTGCAGTAACCAATGACTGACTGTCCTGTTTTTCCACTGGAGTCCTGCCACACCCCCAGTCTGGCCAGGAATACTGAGTAGCTCCAGCATCCTGCCACTTGGAGGCACTGCAGTATAAAGAACCCAGGTGGGAATGGGGTCACTACTATTCCAATGGAGCGATTCTGTTTAATGAGAGTTTGAAAAGAGACAAGAAGATTGCCACAGGCTCTTCATGGGTAATATATGCTATTGTGGGAGCTGGATAGAGATTGGAcagtgttttaaatcatttctaaaacAACACCGTCtactgttatttttcttttactgaaCTAAATGTCCACAGGCCTGTTTCtcttttaattcaaaatgcGACAGTGgcacatacatttaatttaatgcacacacatttCAGATTTGGTGACATTTTATGAGATTACGAATTTTAGCAGTAAGATTACCAATTTTAAATCGGAAAATACTGAACagtaaatattctttttttgcaaCTAAGGTACAAACAGATTTCACATCCATGAAATTCTACATATTAGTTGTGTTGCCATGTCAGTGGCTTTGTTCTCCCAAAAGAAGCGCTGATTtcatgtaaattacattttagtttgttttgaaatgtaattttattaacatttaatgtcTTTGTAAAGTCTTCACAACAGATCATTCAGTCAGTATGTTTAAGAGCGTCTTTCtcgctttaaatgttttctgtggtGCCTTCATGGATTCAGTATcaatgtttaacttttttttatttgtttaaatatgttttgaagctgtaCATGTTAAAACATTGCTGTTTACCATCAAATTCACCTACATGGCATATATGGCTATTCTAAGCTATGCACTGTTGGTGGACGCTTTGTAAATGTCTAATGTTTAATGCTGCCATCCTGTAAATATTGCAAacctattgtttttttgtaaacccCTTTCTATAACAACATTACAAATACTCAGGGGAGGAACTGAAATCAGAGAATTTTGATATACTGAACGgtcattttacaagaaaaatataGGATACTTAAAAATCGTCACTACGAGGCTGTGGtccatattatataaatatatttgacaatTTGGATTCTTTTCAATGTTGGAACCTGTATGAAAGTAACCTCTATTAAACTACATGAATGTG
>XM_043252373.1
GAGCGGCAGAGGCGCTGTGACGTCAGGGCGCGCTGAGACTGGGTCAGCCGGAGGAAGCGGCAGTCAGATCTCCGCGAGACCAGCGCGAGCGCACCGCGTTCAGATTACAGCCGGAGACGCGCCTCTGCACCTCTGCGATACACAGtTTCTCCAACATTGACCGTAGCAAAATGCCATTGGGAGAGGATGGACACtcttggaaaaagaaaacatcgaACATCAAGGACATCTATGACTTTAAAGAAGTTTTGGGAACAGGGGCTTTTTCTGAGGTGATGCTCGCAGAGGAGAAGAGGACAAGAAAACTAGTGGCGATAAAATGCATCCCGAAAAAAGCTCTGGAGGGGAAAGAGAACAGCATTGAAAATGAGATCGCCGTGCTCCACAAGATTAAACATGCCAACATAGTTTCTTTGGAGGACATCTATGAGAGTAAATCACACCTCTACCTTGTCATGCAACTAGTGTCCGGTGGTGAGCTCTTCGACAGGATTGTGGAAAAAGGATTTTACACGGAGAAGGATGCCAGTAAGCTCATCCAGCAGATCCTGGATGCTGTGAAGTACCTGCATGACATGGGCATTGTGCACAGAGACCTGAAGCCAGAGAACCTTCTGTACTACAGTATGGATGAAGACTCCAAAATCATGATCAGTGATTTTGGCCTGTCAAAGATTGAGGGTTCAGGTAGTGTGATGAGCACAGCGTGCGGCACCCCTGGATATGTAGCTCCTGAGGTTTTGGCACAGAAGCCGTATAGTAAAGCAGTGGACTGTTGGTCAATCGGGGTCATCGCTTACATTCTTTTATGTGGCTATCCACCATTTTACGATGAGAATGATGCCAAGCTCTTTGAGCAGATCCTGAAGGCAGAGTACGAGTTTGATTCACCGTACTGGGATGATATCTCTGACTCAGCCAAagattttattgtgcatttaatgGAAAAAGATCCCAGCCAGCGTTACACGTGCGAACAGGCTCTTCAGCACCCATGGATTGCTGGAGACACGGCGTTGGATAAGAATATACATGAATCTGTCAGTGCCCAAATTAAGAAGAACTTTGCCAAAAGCAAGTGGAAGCAAGCATTTAATGCCACAGCAGTAGTTCGTCACATGCGAAGGCTGCAGTTGGGAACCAGTCAGGAGGGCCAAACTCAGTCCACCCTGCCCAGTCCCTGCCACGGGCACCTGCTGCTGCCTGAGGGGGACGAGGAAGAGAGCTCCCTGCGTAGGGAAAATAGTGGCTGTTCTGAGGGTGTCAGTGATGAAAATGACATTCAGAACTGCACCTACCACGTCCATCCTACTAGTCGGGTCTGAGTGTCAATCATCCTGCAGTAACCAATGACTGACTGTCCTGTTTTTCCACTGGAGTCCTGCCACACCCCCAGTCTGGCCAGGAATACTGAGTAGCTCCAGCATCCTGCCACTTGGAGGCACTGCAGTATAAAGAACCCAGGTGGGAATGGGGTCACTACTATTCCAATGGAGCGATTCTGTTTAATGAGAGTTTGAAAAGAGACAAGAAGATTGCCACAGGCTCTTCATGGGTAATATATGCTATTGTGGGAGCTGGATAGAGATTGGAcagtgttttaaatcatttctaaaacAACACCGTCtactgttatttttcttttactgaaCTAAATGTCCACAGGCCTGTTTCtcttttaattcaaaatgcGACAGTGgcacatacatttaatttaatgcacacacatttCAGATTTGGTGACATTTTATGAGATTACGAATTTTAGCAGTAAGATTACCAATTTTAAATCGGAAAATACTGAACagtaaatattctttttttgcaaCTAAGGTACAAACAGATTTCACATCCATGAAATTCTACATATTAGTTGTGTTGCCATGTCAGTGGCTTTGTTCTCCCAAAAGAAGCGCTGATTtcatgtaaattacattttagtttgttttgaaatgtaattttattaacatttaatgtcTTTGTAAAGTCTTCACAACAGATCATTCAGTCAGTATGTTTAAGAGCGTCTTTCtcgctttaaatgttttctgtggtGCCTTCATGGATTCAGTATcaatgtttaacttttttttatttgtttaaatatgttttgaagctgtaCATGTTAAAACATTGCTGTTTACCATCAAATTCACCTACATGGCATATATGGCTATTCTAAGCTATGCACTGTTGGTGGACGCTTTGTAAATGTCTAATGTTTAATGCTGCCATCCTGTAAATATTGCAAacctattgtttttttgtaaacccCTTTCTATAACAACATTACAAATACTCAGGGGAGGAACTGAAATCAGAGAATTTTGATATACTGAACGgtcattttacaagaaaaatataGGATACTTAAAAATCGTCACTACGAGGCTGTGGtccatattatataaatatatttgacaatTTGGATTCTTTTCAATGTTGGAACCTGTATGAAAGTAACCTCTATTAAACTACATGAATGTG

Function

NR:

description
PREDICTED: calcium/calmodulin-dependent protein kinase type 1-like isoform X1

GO: NA

KEGG:

id description
K08794 CAMK1; calcium/calmodulin-dependent protein kinase I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252372.1 False 2464 mRNA 0.42 13 2996499 3037072
XM_043252373.1 True 2487 mRNA 0.43 12 2996499 3037108

Neighbor

gene id symbol gene type direction distance location
LOC122354490 gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding downstream 185135 2807984 ~ 2811364 (-)
trnai-aau_28 NA coding downstream 209553 2786874 ~ 2786946 (-)
trnaf-gaa_28 NA coding downstream 209712 2786710 ~ 2786787 (-)
trnaf-gaa_27 NA coding downstream 211279 2785148 ~ 2785220 (-)
trnap-cgg_6 NA coding downstream 211885 2784543 ~ 2784614 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding upstream 15588 3052696 ~ 3058430 (-)
LOC122354702 NA coding upstream 18589 3055697 ~ 3055773 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding upstream 219771 3256879 ~ 3264114 (-)
pusl1 NA coding upstream 248853 3285961 ~ 3299062 (-)
si:ch211-160o17.6 LOC107699340,LOC107714505,LOC107555993 coding upstream 344377 3381485 ~ 3385791 (-)
LOC122354391 NA non-coding downstream 196471 2799533 ~ 2800028 (-)
G78774 NA non-coding downstream 201203 2795022 ~ 2795296 (-)
G78773 NA non-coding downstream 295770 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 299027 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 299802 2696409 ~ 2696697 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 41906 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 77189 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 186627 3223735 ~ 3241319 (-)
G78903 NA non-coding upstream 194019 3231127 ~ 3232742 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding upstream 229076 3266184 ~ 3266672 (-)
trnai-aau_68 NA other downstream 9968 2986458 ~ 2986531 (-)
trnaf-aaa NA other downstream 11382 2985044 ~ 2985117 (-)
trnap-cgg_28 NA other downstream 12150 2984278 ~ 2984349 (-)
trnai-aau_67 NA other downstream 12956 2983470 ~ 2983543 (-)
trnaf-gaa_80 NA other downstream 13116 2983312 ~ 2983383 (-)
spcs1 spcs1,LOC107566449,LOC107714491,LOC107680421,LOC107699355,LOC107744856,LOC107572401 other upstream 9630 3046738 ~ 3048224 (-)
G78853 gata2a,gata2,LOC107714496 other upstream 75825 3112933 ~ 3113692 (-)
cdab cda,LOC107714500,LOC107751011,LOC107572847,LOC107680435,LOC108436250,LOC105898129 other upstream 216755 3253863 ~ 3256212 (-)
G79003 NA other upstream 502893 3540001 ~ 3541055 (-)
LOC122354343 cpne5b,LOC107680428,LOC107714485,LOC107555996,LOC107699334,LOC107751002,LOC108436414 other upstream 776397 3813505 ~ 3834923 (-)

Expression


Co-expression Network