XLOC_006616


Basic Information

Item Value
gene id XLOC_006616
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 24573086 ~ 24574746 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013786
CTTCAGTCGATCCTAATAAATTAGGCTTGGCGAATGGACATGGATACCACAGATGGCAAACAGGATGAAAACCAGACGAGGAACCAGGAGACACCACACTGGGAGAGACATGGAAGACACAGGAAACGCAAATTGGAATGGACCACATGGAGAAAAAGGGAATCaaacctcagcaatgactggaaaTTGATGGTcaggaattttttaaaaatccagtcGATGGGTGCATGGATGGACGTCCTTGCAAGATACAAGAGTGGTAATCAGTTTGGATGAGGAATTAGGCCTTGTCTGTGtgaggtttttctttttcaggtaatggagaTAGAGCAGGCAGAAGAGGAGCAGGTATGGCTTTGTTGGGGCTGTTTTTGTCTTTTACAGATTGAAGTGgagcagaagaaggagactcaAAAGGCAGGAGATATGCTTCAAGACCTGGAGCTCAGGAAACAGGTAGAACTGCTTAAACAGATTGAACAATGGAGTTAGTTTCCAAAGCAATGTATTAAGATTAATTGAAGacttgatatctttctctttgcaGTTGGAGCATGTGGAGCAACAGGGAAACACACCTGCATGTATGGATGTCCTTCCaggaggaagggggtggtggtgggcatagatagatgtcttgtctgtggctgttatttacaCTGTAGGTAATGGAACCACAACAGACAAAAAAAGAGAGCCTCACAAGCGGAATGGTGAATATTTATCTGAAGAACGCTGGAGAACATTTGGCTTATTGCTGGAGATcaagtcttgtttttgtcttttgcagattagaCTGGGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013786 True 802 lncRNA 0.44 3 24573086 24574746

Neighbor

gene id symbol gene type direction distance location
XLOC_006615 slc1a4 coding downstream 124808 24429918 ~ 24448278 (-)
XLOC_006614 cep68 coding downstream 143991 24421515 ~ 24429095 (-)
XLOC_006613 tbp coding downstream 176887 24381344 ~ 24396199 (-)
XLOC_006612 rhoua coding downstream 193815 24371815 ~ 24379271 (-)
XLOC_006611 NA coding downstream 221543 24346989 ~ 24351543 (-)
XLOC_006617 NA coding upstream 2519 24577265 ~ 24578022 (-)
XLOC_006618 AL831745.1 coding upstream 10478 24585224 ~ 24588220 (-)
XLOC_006619 NA coding upstream 15674 24590420 ~ 24623225 (-)
XLOC_006620 AL831745.2 coding upstream 27664 24602410 ~ 24606627 (-)
XLOC_006621 znf511 coding upstream 90588 24665334 ~ 24669258 (-)
XLOC_006471 BX537274.2 misc downstream 14308181 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 23746861 825904 ~ 826225 (-)
XLOC_006607 CR762497.1 non-coding downstream 286696 24283670 ~ 24286390 (-)
XLOC_006605 CR762497.2 non-coding downstream 445907 24127063 ~ 24127179 (-)
XLOC_006602 AL772289.1 non-coding downstream 611680 23961292 ~ 23961406 (-)
XLOC_006597 NA non-coding downstream 1161455 23408029 ~ 23411631 (-)
XLOC_006629 NA non-coding upstream 635412 25210158 ~ 25284716 (-)

Expression


Co-expression Network