pip4k2cb (pip4k2cb,LOC107730889,LOC107557542)


Basic Information

Item Value
gene id pip4k2cb
gene name pip4k2cb,LOC107730889,LOC107557542
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1635887 ~ 1643236 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252526.1
ACAGCAGTGCATCTCTTCTGCTCTTTTACCAGCACTGAACTTCAGAAAACTCTTATTAGTGAAAACTGTTTGActgctttttgaaaatgaggTAAATTCATCCAGAAGCTAAAGTACTCTTTTCCAAAAGAAACGCTAATCAGGCATGTGACTGTTTTGGATCAAGTTACGAGAAGGTTAATTCTCTCCAGTTTCATCTGAAGCTGGTCAGCGAAGCCGTTTATCCTCTACAGTACACTTTCACTGGGTTGCTGTCTTCATATACTGGGACTTCAAGACATTCATCATCACTAGTGAGAGGACAAGTTGTTTTTGTCTATTATTATCTGAGTATAATTCTGCGATTATGTCTTCTCCTGGTAAGACGGGGACGGTTTCAAACTCAGCGAGAAGACTTTCACGaacaaaaagcaagaaaaaacattttgtgcatcAAAAAGTGGAGGTATTTTGGGCCAGCGATCCCGTCCTGACTGTGTTTATGTGGGGCATCAATCACACGATAAACGACCTCTTTCAAGTGCCCATGCCAGTAATGCTACTTCCAGATGACTTCAAAGccaacataaaaatgaaagtcaATAACCACTTATTCAACAAggaAAACCTCCCTGGACATTTCAAGTTTAAGGAGTACTGCCCACTGGTGTTCAGGAACTTAAGAGAGCGATTTGGAGTTGAACATCAGGACTTTCTGGTTTCTCTTACACGTAGTCCTCCAGCAAAGGATGGCAAGAGTCAGGAAGTGGGACTGGCGTTGACATCATATGACCGAACACTAATTGTCAAGCAAATCTCCAGTGAGGAGGTGGAGGACATGCACAACATCCTTTCAGAGTACCACCAGcACATCGTAACGTGTCACGGTAGCACGCTACTTCCCCAGTTCCTTGGCTTGTACCGTGTGACTGTGGACAATGAAGACGCCTACCTTTTAGTCATGAGAAATATGTTCAGCCACCGACTAACTGTCCACAGGAAATATGACCTTAAGGGGTCACTGGTTTCTCGAGAAGCAAGCGATAAAGAGAAGGGGAAAGAACTGCCGACCTTCAAGGACGTAGATTTCAGAAATAACATGCAGCGAGTGTACATCAGtgaagaggagaaagaaaagctTCTGGATAAGCTGAACAGAGATGTAGAGTTTCTTGCGCGACTGAAGATCATGGACTACAGCCTGCTGCTGGGCATTCATGACGTCGGGAGGGCAGAGCAAGAGGAAGCGGAAGAAATGAAAGACTCTTTGAGCGAAGAGGAGGAGGATTCGGAGAATGACCTGTCCCACACGGCTGTGGGGTCTTTTGGGACGTCACCTGAGGGCATCGCGGGGTACATGAGCTCTTATAAACCTCTCGGTCCGGGAGAGTTTGACCCTTACGTTGACGTGTACGCCATCCAGAGCGCAGTCGGTGCCCCGCACAGAGAGGTGTACTTCATGGGTCTCATAAACATCCTGAGCCAGTATGATACCAAGAAGAAAGCAGCCCATGCAGCAAAAACGGTCAAGCACGGAGCTGGAGCTGAAATCTCTGCAGTTCATCCCGAGCAGTACGCCAGGCGCTTCAGAGAATTCGTTGCAAACATCTTTGCCTGATCGAgagcatttgaaatatattcttacaaaatgtaatgcgcgtaaaaaaaaaacaaaaaaaaaaacacgttgaTTTGGAGATGGTGGTTTGTGCgatttatgattattaaattatttgaaaagcattatttaatgatatatattttttaaatatagaataaaaatcGTCATGATCAATAAATCGGCTTGAATCTTATATTAAAACTCTGATTTGCAATAAAATGtgataatacaaatattaaa

Function

symbol description
pip4k2cb Predicted to enable ATP binding activity and phosphatidylinositol phosphate kinase activity. Predicted to act upstream of or within phosphatidylinositol metabolic process and phosphorylation. Orthologous to human PIP4K2C (phosphatidylinositol-5-phosphate 4-kinase type 2 gamma).

NR:

description
PREDICTED: phosphatidylinositol 5-phosphate 4-kinase type-2 gamma-like

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0016307 phosphatidylinositol phosphate kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252526.1 True 1840 mRNA 0.43 10 1635887 1643236

Neighbor

gene id symbol gene type direction distance location
igfbp6a LOC107718979,LOC107687374,LOC107696018,LOC107730876,LOC107557535 coding upstream 2183 1631827 ~ 1633704 (+)
lima1b LOC107707364,LOC107687370,LOC107754562,LOC107551335 coding upstream 17361 1601707 ~ 1618526 (+)
hoxc6b LOC107551320,LOC107707362,LOC107660782 coding upstream 91123 1543622 ~ 1544764 (+)
hoxc13b NA coding upstream 97873 1536027 ~ 1538014 (+)
lrp1aa LOC107654787,LOC106565466 coding upstream 221088 1308673 ~ 1414799 (+)
ube2v1 ube2v1,LOC107572061,LOC107683645,LOC105022328,LOC106572481,LOC103044311,LOC108425074 coding downstream 1662 1644898 ~ 1650340 (+)
csnk2a4 LOC107730901,LOC107683644,LOC107572060,LOC107696034,LOC104930306,LOC108424612,LOC103042686 coding downstream 7254 1650490 ~ 1657144 (+)
tp53rk tp53rk,LOC107557544,LOC107730899,LOC107696036,LOC107572066,LOC107683647 coding downstream 18849 1662085 ~ 1664340 (+)
zgc:113184 LOC107683652,LOC107737353,LOC107572062,LOC107557547,LOC107730888,LOC107696038 coding downstream 57447 1700683 ~ 1703661 (+)
dnajc14 LOC107683641,LOC107737354,LOC107730896,LOC107696039,LOC107557550 coding downstream 74078 1717314 ~ 1723715 (+)
G78490 NA non-coding upstream 60762 1572594 ~ 1575125 (+)
G78484 NA non-coding upstream 73231 1558860 ~ 1562656 (+)
G78472 LOC107557538,LOC107681486,LOC107707358,LOC107551319 non-coding upstream 106730 1524347 ~ 1529157 (+)
G78471 LOC107551319 non-coding upstream 111809 1521976 ~ 1524078 (+)
G78479 NA non-coding upstream 121709 1513879 ~ 1514178 (+)
G78517 NA non-coding downstream 25786 1669022 ~ 1669695 (+)
G78540 NA non-coding downstream 123135 1766371 ~ 1766589 (+)
G78625 NA non-coding downstream 158115 1801351 ~ 1802313 (+)
G78652 LOC107550538,LOC107697642 non-coding downstream 255497 1898733 ~ 1899063 (+)
G78674 NA non-coding downstream 293624 1936860 ~ 1939086 (+)
G78500 NA other upstream 42762 1590744 ~ 1593125 (+)
rargb LOC107730622,LOC107681487,LOC107551317,LOC107681495,LOC107754558,LOC107557540,LOC108424631,LOC105907526 other upstream 117924 1485707 ~ 1517963 (+)
rbms2a rbms2,LOC107730618,LOC108424578,LOC107654803,LOC107565002,LOC107709509,LOC102312407,LOC107681488,LOC107551328 other upstream 186927 1419520 ~ 1448960 (+)
LOC122353696 LOC107670931,LOC107551313 other upstream 444166 1186866 ~ 1191721 (+)
cnbpb cnbpb,cnbp,LOC107742027,LOC107675970,LOC108431552,LOC106566283 other upstream 558488 1074707 ~ 1077399 (+)
G78506 inpp1,LOC107737355,LOC107683640,LOC107730897 other downstream 1395 1644631 ~ 1726097 (+)
nabp2 si:ch73-190f16.2,nabp2,LOC107572067,LOC107557546,LOC107683643,LOC107675336,LOC107737367,LOC106565411 other downstream 34990 1678226 ~ 1681200 (+)
G78763 NA other downstream 1034899 2678135 ~ 2680142 (+)
G78790 NA other downstream 1182303 2825539 ~ 2826794 (+)
camk2n1 si:dkey-33m11.6,LOC107572850,LOC107680422,LOC107555994,LOC107751034,LOC107714486,LOC107699327 other downstream 1626963 3270199 ~ 3272619 (+)

Expression


Co-expression Network