LOC122354395 (hrasls,LOC107569888,LOC107713876,LOC107693015,LOC108435900)


Basic Information

Item Value
gene id LOC122354395
gene name hrasls,LOC107569888,LOC107713876,LOC107693015,LOC108435900
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 10760857 ~ 10761894 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252547.1
ATGACTACTACAGACGAGAGTCCGGCGGCCGCCGTGTCCAGCGTGAAGTCCGTCTTCAGCCGCAAGGCCGTGGTCCGCATGCAGCTCCTGAAGGAGGTGGTGGGAGGAGACTCGTACCGCATCAATAACAAGTATGACGACGATCACACTCCGCTGGCCGTGTCTGAGATCATCCAGAGAGCGCAGCTGCTCATCGGTCAGGAGGTGTCCTACGACCTGCTGGGCAGTAACTGTGAGCACTTCGTCACGCTCCTGCGCTACGGGGAGGGCGTCTCTGAGCAGgcGTCTCGGGCCATCGGGGCCATCAGTTTAGTGACGGCTGCAGCGAGTGCGTTCTCAGTGCTGGGTCTGATCAACACACGCTCCAGAAACAGACCCTTCTAGAGCCCGTCCGGAGAAGATCCGAGCTCAGGGGAACTTAACTCTTGCTGTGACGCTATGA

Function

NR:

description
PREDICTED: phospholipid-metabolizing enzyme A-C1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252547.1 True 442 mRNA 0.60 3 10760857 10761894

Neighbor

gene id symbol gene type direction distance location
LOC122354278 LOC107654948,LOC107705440,LOC107736540,LOC107682154,LOC100538248 coding upstream 26219 10726151 ~ 10734638 (+)
LOC122354281 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding upstream 39258 10716529 ~ 10721599 (+)
LOC122354282 gmfb,LOC107705437,LOC107553212,LOC107602964,LOC102779377 coding upstream 45607 10711448 ~ 10715250 (+)
rab11a rab11a,LOC105007892,LOC106591986,LOC100698633,LOC106588008,LOC103378951,LOC106562755 coding upstream 495172 10259698 ~ 10265685 (+)
lims1 lims1,LOC107687747,LOC107715819,LOC107572539,LOC104918652 coding upstream 881650 9870254 ~ 9879207 (+)
LOC122353582 NA coding downstream 276249 11038143 ~ 11042220 (+)
LOC122353580 NA coding downstream 278967 11040861 ~ 11051215 (+)
LOC122353583 LOC107747909 coding downstream 294488 11056382 ~ 11080781 (+)
gemin6 gemin6,LOC107682381 coding downstream 383295 11145189 ~ 11146821 (+)
rfc4 rfc4 coding downstream 423557 11185451 ~ 11189834 (+)
G80641 NA non-coding upstream 66219 10694116 ~ 10694638 (+)
G80632 NA non-coding upstream 131898 10628554 ~ 10628959 (+)
G80630 NA non-coding upstream 184863 10575404 ~ 10575994 (+)
G80621 NA non-coding upstream 190644 10567207 ~ 10570213 (+)
G80562 NA non-coding upstream 313072 10446450 ~ 10447785 (+)
G80700 NA non-coding downstream 149295 10911189 ~ 10911883 (+)
G80705 NA non-coding downstream 319452 11081346 ~ 11082289 (+)
G80706 LOC102201770 non-coding downstream 321502 11083396 ~ 11084687 (+)
G80719 NA non-coding downstream 332537 11094431 ~ 11139033 (+)
G80730 NA non-coding downstream 348643 11110537 ~ 11111834 (+)
G80638 NA other upstream 98887 10641132 ~ 10661970 (+)
G80551 LOC107659525,LOC107581741,LOC107718227,LOC107685975,LOC107573079,LOC103355429 other upstream 289670 10466622 ~ 10471187 (+)
pik3ca pik3ca,LOC107574159,LOC107685965 other upstream 1220736 9521798 ~ 9540121 (+)
chchd4a chchd4a,chchd4,LOC107574929,LOC107715767 other upstream 1335555 9422950 ~ 9425302 (+)
itpr1b itpr1,LOC107685975,LOC107659525 other upstream 1781616 8891450 ~ 8979241 (+)
G80761 NA other downstream 460453 11222347 ~ 11226622 (+)
LOC122354145 pfkl,pfklb,LOC107564579,LOC108444469 other downstream 743759 11505653 ~ 11507771 (+)
rpl37a rpl37a,RPL37A,zgc:171772,LOC107564751,LOC107567628 other downstream 763129 11525023 ~ 11527042 (+)
eif4a3 eif4a3,LOC107702040 other downstream 766825 11528719 ~ 11535114 (+)
LOC122354243 irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107683260,LOC107740065 other downstream 818132 11580026 ~ 11672957 (+)

Expression


Co-expression Network