XLOC_006617


Basic Information

Item Value
gene id XLOC_006617
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 24577265 ~ 24578022 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013787
aagataaTTGAATAAGGCGGCGTATTGGCGTTGCTGTGGTTACCATATTCAGTGGCGTTCTAAAAAAGAATGTGTTCGAAAAACCGTCGATGACGTTGAGAAACTGGTGTGACCTGCATTAAGTTTCTGGCCATCGCTGACATTGGACGGTATGTAAAGATCtttctaaaatgtaatttagGTTATTATATTTGGTTGTTTCGATGTGCTTTTGGTGCAGGACACTAAATATTTTAGTATTTCTCTCTGTCATATCGTTTCagaatattttattagtttttccaCATATTTTTTCGGTTAGACTGTAGATTGTAATGAATGTTGGTTGGAATTGGAGATTGCTGTATTgttgaattttatatttattttcaatatatttatttgattttgaaaaaatatatgtaaataaattttaaaaatgtagtttatgCTGTCTGCCTGTTCAACATTTGCAGATTTTCATTGTCATTTGTTCTATTGACAGTGTTACTAATTATTGTAATGCATTAATCTATTCTAAGTTTATATATTGTCCTCTTGTAGAGTATTTACTTAAAGCTGCGAAATATTATTTGTTAGTATCAGAACAGAATCAGACTGGAGACAATGATAGATAAAACTTCAAAAGAGTGGTATTAAGATAAATGAAGGACTTGATatctttctattgtattttacagATTGGAATGGACCACATGGAGAAAAAGGGAATCACACATCTCAGCAACAACTGGAAATTGATAGTCaggaatttcttt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013787 True 758 lncRNA 0.31 1 24577265 24578022

Neighbor

gene id symbol gene type direction distance location
XLOC_006616 NA coding downstream 2519 24573086 ~ 24574746 (-)
XLOC_006615 slc1a4 coding downstream 128987 24429918 ~ 24448278 (-)
XLOC_006614 cep68 coding downstream 148170 24421515 ~ 24429095 (-)
XLOC_006613 tbp coding downstream 181066 24381344 ~ 24396199 (-)
XLOC_006612 rhoua coding downstream 197994 24371815 ~ 24379271 (-)
XLOC_006618 AL831745.1 coding upstream 7202 24585224 ~ 24588220 (-)
XLOC_006619 NA coding upstream 12398 24590420 ~ 24623225 (-)
XLOC_006620 AL831745.2 coding upstream 24388 24602410 ~ 24606627 (-)
XLOC_006621 znf511 coding upstream 87312 24665334 ~ 24669258 (-)
XLOC_006622 erlin1 coding upstream 123384 24701406 ~ 24717618 (-)
XLOC_006471 BX537274.2 misc downstream 14312360 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 23751040 825904 ~ 826225 (-)
XLOC_006611 NA non-coding downstream 225722 24346989 ~ 24351543 (-)
XLOC_006607 CR762497.1 non-coding downstream 290875 24283670 ~ 24286390 (-)
XLOC_006605 CR762497.2 non-coding downstream 450086 24127063 ~ 24127179 (-)
XLOC_006602 AL772289.1 non-coding downstream 615859 23961292 ~ 23961406 (-)
XLOC_006629 NA non-coding upstream 632136 25210158 ~ 25284716 (-)
XLOC_006633 BX005252.1 non-coding upstream 952512 25530534 ~ 25530648 (-)

Expression


Co-expression Network