dda1 (dda1,LOC107685208,LOC105913185)


Basic Information

Item Value
gene id dda1
gene name dda1,LOC107685208,LOC105913185
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 13261384 ~ 13264933 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252704.1
gagagagagagagagagagagagagagagagagagagagagacttgtcAGTCGGTATCTGTAAGCTGTAGCAGACACTGTGGTGTGTAGCTGCTGTCTGTTTGTGTTCACacgtatttctgtgttttagtgTCGTATTCAGTAGTacgagtgtgtgagtgtgtgtgtgttgccggCTTCAAATCTCTGGTTTCTGTCAGTGTTCAGGCCTGTCTGAGCACAAGCACACCCAcaggactggactggactgacTTCACCATGGACAAAGCGGATTTCCTGAAAGGTCTACCTGTATACAACAAGACAAACTTCAGCAGATTTCACGCGGATTCTGTATGTAAAGCATCGAACAGAAGGCCTTCGGTATATCTGCCTACACGAGAGTATCCCTCCGAACAGATCATCGTCACAGAGAAGACAAACATCCTTCTGCGTTATCTTCATCAGCAGTGGGACAAAAAGAATGCAGCTAAAAAGCGCGAGCAGGAGCAAGCGGAAGGGGAAGGTGGCAGCCCAGCGCCTCCCAGGAAAATCGCCCGGACAGACAGCCAGGAGATGAACGAGGACTCCTAGAGGAACCCACCATCCAACAGCACCAGAACGGACACAACAAGCCCAAACACCCGCACACCACACAGGAATTTCAtctcagaaagaaagaaagaaatggaagAACACTTCTCTTgcagtgtgctttttttaattttactgagTGCTTCCTGATGCAGTCAGTGCCCTGTTCTGAACGCGTGTGGCGCGACGGGTTTCCACTGCCAGCTTCGACGATTCTGCTGAACTCTGAACTGCGAGGGGAGGGGGCGGGTACAACGAAATTCAACAAGCACATATACGAATGAACGTCTGCTATGAAGACGCGTGTGAAAAATTGATTTGTTAGGACACTATTAACGCAGTCTAAAAGTTTCAAAACACCCTAGTAATCTCGGCTGTGAATTACCGCTTTTCATGATGTACTCGGGAACACAGGCACTAAACGCACAGGCGTCTCTCTCTCCAGCGTCCGAAAAAGGGAAATTTCAGAAATGTACAGGCACGTTCGACAGATTTAGATGTAGTGTTTAGTGTTGGTAAGTTGACGGTCTTCCTAGCAGGTGCATACTTGTGCATGAATGCACTGTCGGGACAGTTTTTCTGTTGTCACAGGTTGAGGATGACGTTACCGGCGATTTAAAGACATGCAGATGTCATTCTCTTTCACTTCTCCCGTTGTCACGTAGGTTTTCCAGTGCTGTGTTTGTTCCACAATCATAAACTGATTACTTGCCTTCA

Function

symbol description
dda1 Predicted to be involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process and protein polyubiquitination. Predicted to act upstream of or within regulation of proteasomal ubiquitin-dependent protein catabolic process. Predicted to be part of Cul4-RING E3 ubiquitin ligase complex. Orthologous to human DDA1 (DET1 and DDB1 associated 1).

NR:

description
DET1- and DDB1-associated protein 1 isoform X1

GO: NA

KEGG:

id description
K11792 DDA1; DET1- and DDB1-associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252704.1 True 1289 mRNA 0.48 5 13261384 13264933

Neighbor

gene id symbol gene type direction distance location
abhd8b abhd8b,abhd8,LOC107747334,LOC107578087,LOC107680465 coding downstream 142 13256637 ~ 13261242 (-)
gamt gamt,LOC107747770,LOC107597217,LOC107685360,LOC107680536,LOC107553529,LOC107757934 coding downstream 30241 13227645 ~ 13231143 (-)
LOC122353867 sult6b1,LOC107680496,LOC107552400,LOC107744587,LOC107713000,LOC107557424,LOC107657965 coding downstream 261258 12995247 ~ 13000126 (-)
slc29a1b slc29a1b,LOC107712971,LOC107741993,LOC107552398,LOC107680494,LOC107557422 coding downstream 279544 12967576 ~ 12981840 (-)
dennd6aa dennd6a,LOC107680547,LOC107657973,LOC107597203,LOC107712949 coding downstream 494718 12747106 ~ 12766666 (-)
ano8b ano8,ano8b,LOC107685197,LOC107680545,LOC107597162,LOC107747324 coding upstream 1901 13266834 ~ 13287916 (-)
plvapb plvap,LOC107680480,LOC107747760,LOC107597160,LOC107685179,LOC107757946 coding upstream 37412 13302345 ~ 13307142 (-)
babam1 babam1,LOC107747315,LOC107680561,LOC107685168 coding upstream 45389 13310322 ~ 13315638 (-)
nrtn nrtn,LOC107597152,LOC107680454,LOC107747182,LOC107685306,LOC107757927 coding upstream 161321 13426254 ~ 13442667 (-)
ndufa11 ndufa11,LOC107747164,LOC107680555,LOC107685299,LOC107553555,LOC107757926,LOC107597150 coding upstream 192261 13457194 ~ 13459276 (-)
G81611 NA non-coding downstream 15111 13233801 ~ 13246273 (-)
G81608 NA non-coding downstream 36523 13222525 ~ 13224861 (-)
G81605 NA non-coding downstream 40720 13218964 ~ 13220664 (-)
G81578 LOC107747780 non-coding downstream 100074 13160173 ~ 13161310 (-)
G81540 NA non-coding downstream 213234 13047571 ~ 13048150 (-)
G81619 ushbp1,LOC107680560,LOC107747291,LOC107597197 non-coding upstream 55233 13320166 ~ 13322021 (-)
G81621 ushbp1,LOC107680560,LOC107747291 non-coding upstream 58746 13323679 ~ 13325131 (-)
G81624 NA non-coding upstream 64471 13329404 ~ 13330007 (-)
G81643 NA non-coding upstream 124798 13389731 ~ 13390119 (-)
G81657 LOC107757942 non-coding upstream 195541 13460474 ~ 13701441 (-)
G81512 NA other downstream 203503 12817753 ~ 13057881 (-)
vipb LOC107557425,LOC107657966,LOC107680498,LOC107713001,LOC107741995,LOC107552401 other downstream 271427 12984373 ~ 12989957 (-)
LOC122353859 NA other downstream 295751 12956861 ~ 12965633 (-)
G81523 NA other downstream 365254 12890281 ~ 12896130 (-)
hesx1 hesx1,LOC107712966,LOC107657957,LOC107557393,LOC107680467 other downstream 593796 12663831 ~ 12667588 (-)
ccl25b LOC107680477 other upstream 85003 13349936 ~ 13394008 (-)
ccl44 ccl44,LOC107597158,LOC107685327,LOC107553533 other upstream 101634 13366567 ~ 13369997 (-)
G81663 NA other upstream 307798 13572731 ~ 13593554 (-)
G81666 vmac,LOC107757942,LOC107680554,LOC107685109 other upstream 341339 13606272 ~ 13609604 (-)
G81650 NA other upstream 433166 13698099 ~ 13699958 (-)

Expression


Co-expression Network