XLOC_006618 (AL831745.1)


Basic Information

Item Value
gene id XLOC_006618
gene name AL831745.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 24585224 ~ 24588220 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012770
AAGTCAAAATAGCCTACGTTTTCAAATTTTAATTCGTTACGTAAATGCAACTATAATTGTTGAATAGTCTCCGATTTTCTTCTGCCTGTAGTCACACGTGTATCATTGCgtttattgtaattattgtaGATAACGTAGGTCtgataaataaattgattatttGTTTTCAGCTGTGAACTTTAGACTCTTTACGTTGAGTGTCAATAATTTCGTTCCCCATAATATAGATAGCATAATATCAATTCCGCATCAAAAGCTAAACAtgtcagttttatttaaaatacatttcaatgattGGGTGATAAATTGTGACGTATGCTTATTTCAATTTGATGTTAACTTCTAAAGAAATTAAcactttattatcatcatcatcatcatataaatGATTACACCGAGACACATggtaggaaaaaataaaaacacagcaccTGCAGGTCCAAAGTCAGTTTGTTGCTGAACTTTGATCTCCATTTATCACAGGTAAGTATGCTAGTAatcatatttgcatttaaaactgCTTCCTTATTTCACTGTGACAGTCACTGTGGAAGGAACCACCATGATCAGGTTTTCTGTTGTAATCTGCCTATCAGTGCTGCTGTTCAGCACTTCAGCCAAACCATACAGACCCAGGGAAAGAGTGTTCAAGGCTGACAATGCAGTTCAGGACACTATAGTTTTTGATGAGAAGATGTTCCTAGGAATGAAGGAGGTGGAGCCAAAGGAGGACATGGATATTACAGATTTTGACATCGATCCTGACATGATGGTTTGGAAAGCTGCAAAAGACGAAATCCTGCAGAAATACAACCGACCTGAAGAGGATAAAGACGCTCTCTACCACCCCTTTGACATGAAACATCCAGTTGACCCTGAAATCTATGTTCAGCCACAAGGATATGACCGGGTACTGAAGTATGACAAGCCAGAAGAAGACAGAGATGATCTGTACCATGGCAGGTTTAATGTAGCCAAGGAGCCAATCAGAAGAGAGAAGGATGTAATTGGAGGTAATAATGTCAGACCCATTTACTCAAGCCCTGAAGAGGACAAAGATGACCTGTACCACGCCAAAGTCAGAGGACAACCGTCTGACCAAGAGGCTCAGCCGATTTATTTCTTGCCCATACGCCCCAAAAGGGTTCACACAGAACCAGAGGTAGACCTGGATGATGTTTATCATAAGCAATGATTAAATTATGTCATGTCTAAGGGACTACAATTATGGATCATATCCTTTTAATtccaattaatacatttatttaattgaaaatgttttttagcaTGTCAAAATGTTTAGCATGTCTTGAACTCatcaaaacaataattaataagcCTTATTAACTTATTGTTTAGTactgaatgttttaaacaaatgtaggaatcttttattttgaaaatatataatacaatgaCTGAATGTATTTTATAAGAGGGCAAAAGTAtgacattttcattgttttagaAATAAGCTATTCACAAAGCTTAATTGTTAACTCACAAAATGAAATGTGATCAGCTGTGGATCGAGCTACACCTGCaaagctaaactaaaataaatgttatttttaaatttgttttattaaatgaattgCCTGATTTCCAGAGACCTACAGAGATTATCAACAGAAAGAAAAATGTTTGTCatcaaaatcaaaaaataaaattaataacttacatttttatacaattaTATGCAATCCTTTTTAATGTATGTGCAATATCTATCGGTCTACTAACTTTAGCACTGACAAAGAGCTCTCTTCTTTTAGCATTGTTCTTCAGGAGGAATGACACCTTTCTTGATGATGAGATTTCCATACAGTGCAGTCTCCCTAACAGGGagatttaaatacaattaattattattattattatctgaaaTAAACAGACCACTTATAAATAATAGTTAAATGCTCACCCAGTTGCAACTACAGCAAATGCTTTCTTTGCACGCTCATAAAATGCAAACCGCTCAACAGGCTTCATGTTACcctgagaaggaaaaaaaaaagttaatttctacTATACCTATACTGAATACACAACATTTTAGTAGCAATGAATAGTCCTCATCATATGAGTTATGACTTTATTTGTATGTAACTGCTTACATCTGATCCTGCTTGTTTTAGGAGCTCTGAGTACTGGTCCCATATCGGCACTTTCAGCCCCTTTAATAAGTCACTAGGCACAAGGTCCATGACAGCTGCCTAACAATTCAGACAAAACCTACAATTATGTAAAGTTACAAACATGAGCAAACTGAGTTTAACTTTCAAAAAATGCCACATGTCAGCACTCACCGACTCATCATAAGTATCAAGAGGAAAAAGCTTCAGGATTGCCTTCAGAAGTTCTGGTATACGCACACCTTAAAACAGTTTGGTTAAACATTGCAATTAATGCTTATTGGAAaactatgatttatttattaattattctagAACTAATGTAATTATGTTAAATCAGAATAAATAAACATGAGATTTGTATA

Function

GO:

id name namespace
GO:0042737 drug catabolic process biological_process
GO:0042738 exogenous drug catabolic process biological_process
GO:0006082 organic acid metabolic process biological_process
GO:0042493 response to drug biological_process
GO:1901615 organic hydroxy compound metabolic process biological_process
GO:0017144 drug metabolic process biological_process
GO:0009410 response to xenobiotic stimulus biological_process
GO:0044281 small molecule metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0009712 catechol-containing compound metabolic process biological_process
GO:0071466 cellular response to xenobiotic stimulus biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0008395 steroid hydroxylase activity molecular_function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0008131 primary amine oxidase activity molecular_function
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0004180 carboxypeptidase activity molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0046906 tetrapyrrole binding molecular_function
GO:0046914 transition metal ion binding molecular_function
GO:0008233 peptidase activity molecular_function
GO:0004304 estrone sulfotransferase activity molecular_function
GO:0008238 exopeptidase activity molecular_function
GO:0008241 peptidyl-dipeptidase activity molecular_function
GO:0003824 catalytic activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000039423

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012770 True 2500 lncRNA 0.34 4 24585224 24588220

Neighbor

gene id symbol gene type direction distance location
XLOC_006617 NA coding downstream 7202 24577265 ~ 24578022 (-)
XLOC_006616 NA coding downstream 10478 24573086 ~ 24574746 (-)
XLOC_006615 slc1a4 coding downstream 136946 24429918 ~ 24448278 (-)
XLOC_006614 cep68 coding downstream 156129 24421515 ~ 24429095 (-)
XLOC_006613 tbp coding downstream 189025 24381344 ~ 24396199 (-)
XLOC_006619 NA coding upstream 2200 24590420 ~ 24623225 (-)
XLOC_006620 AL831745.2 coding upstream 14190 24602410 ~ 24606627 (-)
XLOC_006621 znf511 coding upstream 77114 24665334 ~ 24669258 (-)
XLOC_006622 erlin1 coding upstream 113186 24701406 ~ 24717618 (-)
XLOC_006623 sfr1 coding upstream 154504 24742724 ~ 24745288 (-)
XLOC_006471 BX537274.2 misc downstream 14320319 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 23758999 825904 ~ 826225 (-)
XLOC_006611 NA non-coding downstream 233681 24346989 ~ 24351543 (-)
XLOC_006607 CR762497.1 non-coding downstream 298834 24283670 ~ 24286390 (-)
XLOC_006605 CR762497.2 non-coding downstream 458045 24127063 ~ 24127179 (-)
XLOC_006629 NA non-coding upstream 621938 25210158 ~ 25284716 (-)
XLOC_006633 BX005252.1 non-coding upstream 942314 25530534 ~ 25530648 (-)
XLOC_006640 NA non-coding upstream 1188169 25776389 ~ 25778815 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_12585843_12587149 NA coding CI01000012 null 12585843 ~ 12587209 (+)