LOC122353680


Basic Information

Item Value
gene id LOC122353680
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1071074 ~ 1074580 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252047.1
CAAACCACCTTAACGGAGCGTCACGGACAGCTGCGTCGGAggcgagcgcgcgcgcgctaTCAGGGTCGTGCGCAGAGCGCGGTGGGCGGGGCGGAGAAGTCGCGTGCCGTGCGCAGAGCGCGTGTGGCGCAGCGCAGAGAGGAGGAACATAAACAGCTACAGTCACGTCGCCGAGGTGAGTTCCCTTAAAGGACGAAAACACGACATTTAGCTCGATGCTTACGACGCGGTGCCGTCGCCGCGGTCTCGGAGAGCGTCCCCGCCGTGCCGAGGCGCCGGAGCTGCGTTTGTAAGGCGAGCCGTTGAGGGCGAGCGCGTCCAGAAAGtcagaGGCTATGAGCAGtaacgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252047.1 True 349 lncRNA 0.65 3 1071074 1074580

Neighbor

gene id symbol gene type direction distance location
mkrn2 mkrn2,LOC107742032,LOC107675967,LOC107571211,LOC107571213 coding upstream 17206 1046350 ~ 1053868 (+)
pparg pparg,LOC107571218,LOC107742034,LOC107667870 coding upstream 41857 1003243 ~ 1029217 (+)
syn2b syn2,syn2b,LOC107758022,LOC107742035,LOC107667867 coding upstream 69360 942791 ~ 1001714 (+)
hrh1 hrh1,LOC107697554,LOC107750035,LOC107570335,LOC107576492 coding upstream 225166 841632 ~ 845908 (+)
slc6a1b slc6a1,slc6a1b,LOC107670967,LOC107746710,LOC107697564 coding upstream 295170 767288 ~ 775904 (+)
isy1 isy1,LOC107700632,LOC108431508,LOC108254962,LOC102298134,LOC101070566 coding downstream 2959 1077539 ~ 1083253 (+)
zgc:77375 zgc:77375,LOC107700631,LOC107758152,LOC108431553,LOC105013113 coding downstream 9391 1083971 ~ 1093073 (+)
nuf2 nuf2,LOC107570127,LOC107550318 coding downstream 23913 1098493 ~ 1105706 (+)
znf831 LOC107558955,LOC107730612,LOC107670927 coding downstream 93572 1168152 ~ 1179799 (+)
ppp1r3db LOC107730614,LOC107551316,LOC107654797,LOC107722003 coding downstream 137267 1211847 ~ 1213545 (+)
G78089 NA non-coding upstream 645996 424386 ~ 425078 (+)
G78067 cyp27b1 non-coding upstream 659649 270996 ~ 411425 (+)
G78081 LOC107747831,LOC107561793,LOC107684010 non-coding upstream 662670 405735 ~ 408404 (+)
G78047 NA non-coding upstream 665601 402445 ~ 405473 (+)
LOC122353670 NA non-coding upstream 666104 403452 ~ 404970 (+)
G78370 NA non-coding downstream 120644 1195224 ~ 1195463 (+)
G78380 NA non-coding downstream 142644 1217224 ~ 1222835 (+)
G78400 LOC107747473,LOC107550334,LOC107654802 non-coding downstream 201935 1276515 ~ 1277127 (+)
G78455 NA non-coding downstream 348153 1422733 ~ 1425764 (+)
G78467 NA non-coding downstream 395088 1469668 ~ 1471384 (+)
tsen2 tsen2 other upstream 30835 1034409 ~ 1040239 (+)
atg7 atg7,vgll4,vgll4b,LOC107697561,LOC107750032,LOC107750033,LOC107697562 other upstream 157275 848175 ~ 913799 (+)
atp2b2 atp2b2,LOC107561799,LOC107570616,LOC107746712,LOC102776443,LOC107697566 other upstream 361584 603138 ~ 709490 (+)
iars1 iars,LOC107697556 other upstream 471703 586415 ~ 599371 (+)
G78084 NA other upstream 658321 412039 ~ 412753 (+)
cnbpb cnbpb,cnbp,LOC107742027,LOC107675970,LOC108431552,LOC106566283 other downstream 127 1074707 ~ 1077399 (+)
LOC122353696 LOC107670931,LOC107551313 other downstream 112286 1186866 ~ 1191721 (+)
rbms2a rbms2,LOC107730618,LOC108424578,LOC107654803,LOC107565002,LOC107709509,LOC102312407,LOC107681488,LOC107551328 other downstream 344940 1419520 ~ 1448960 (+)
rargb LOC107730622,LOC107681487,LOC107551317,LOC107681495,LOC107754558,LOC107557540,LOC108424631,LOC105907526 other downstream 411127 1485707 ~ 1517963 (+)
G78500 NA other downstream 516164 1590744 ~ 1593125 (+)

Expression


Co-expression Network