LOC122353897


Basic Information

Item Value
gene id LOC122353897
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 12710406 ~ 12715974 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252068.1
GGGGATGTAACGGGAAAATAATATAGTTGAGAATGACAGCCGGTTCAACATGTGCGCGGAGTAGACAAACATCCGGTGACCTACGCGATCGGAACGATTTGCTTATTCGGAAAAACACATTCGACATGTTTAATAAGGAGCCTTTGGTGTCCACCGGTGCGTCTGGGCTGAAGGTCCTCTCGGTGAGATCCACCAAGCTGTGGTTCCTGTACCTGATGGCCAGTTTGCGGGCTCTGAAGAGGATGCAGGTCTTTCCGTTGTAAGAAACGCTCAGGGGAGAATAGGGCAACATTCCCGGAGACTGAAGCAACTTCCTGCGAGGAGGAGCGTGAAGCTGCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252068.1 True 341 lncRNA 0.52 2 12710406 12715974

Neighbor

gene id symbol gene type direction distance location
rps23 rps23,rs23,LOC107680479,LOC106566095 coding downstream 8752 12700227 ~ 12701654 (-)
asb14a asb14,LOC107680484 coding downstream 14676 12685223 ~ 12695730 (-)
appl1 appl1,LOC107712995 coding downstream 25519 12671167 ~ 12684887 (-)
il17rd il17rd,LOC107680557,LOC107597177,LOC107657971,LOC107557418 coding downstream 50722 12612824 ~ 12659684 (-)
zgc:194981 NA coding downstream 100674 12607236 ~ 12609732 (-)
arf4a arf4a,LOC108431611,LOC107680528,LOC107747489,LOC107597170,LOC108254969,LOC107599973 coding upstream 3942 12719916 ~ 12724608 (-)
LOC122353878 zgc:110286,LOC107597171,LOC107747504,LOC107712992,LOC107597172,LOC107557402,LOC107747513 coding upstream 9800 12725774 ~ 12728048 (-)
LOC122353875 arf4b,LOC107597172,LOC107557402,LOC107747513,LOC107680530,LOC107712993,LOC107657960 coding upstream 13357 12729331 ~ 12732117 (-)
LOC122353868 NA coding upstream 22026 12738000 ~ 12744145 (-)
dennd6aa dennd6a,LOC107680547,LOC107657973,LOC107597203,LOC107712949 coding upstream 31132 12747106 ~ 12766666 (-)
G81353 NA non-coding downstream 135293 12574863 ~ 12575113 (-)
G81350 NA non-coding downstream 142097 12568109 ~ 12568309 (-)
G81349 NA non-coding downstream 174980 12534950 ~ 12535426 (-)
G81327 NA non-coding downstream 186822 12483243 ~ 12523584 (-)
G81330 eml6,LOC107680471,LOC107597181,LOC107747670,LOC107712954 non-coding downstream 216465 12493104 ~ 12493941 (-)
G81514 NA non-coding upstream 151704 12867678 ~ 12870246 (-)
G81522 NA non-coding upstream 172954 12888928 ~ 12890216 (-)
G81524 NA non-coding upstream 177965 12893939 ~ 12895846 (-)
G81528 NA non-coding upstream 249822 12965796 ~ 12998617 (-)
G81540 NA non-coding upstream 331597 13047571 ~ 13048150 (-)
hesx1 hesx1,LOC107712966,LOC107657957,LOC107557393,LOC107680467 other downstream 42818 12663831 ~ 12667588 (-)
G81318 NA other downstream 263119 12445860 ~ 12447287 (-)
G81192 NA other downstream 636331 12073596 ~ 12074075 (-)
ero1b ero1b other downstream 929597 11766831 ~ 11780809 (-)
strn strn,LOC107702041,LOC107701064,LOC108430145,LOC107713228,LOC108271087 other downstream 1078719 11536500 ~ 11631687 (-)
G81512 NA other upstream 101779 12817753 ~ 13057881 (-)
G81523 NA other upstream 174307 12890281 ~ 12896130 (-)
LOC122353859 NA other upstream 240887 12956861 ~ 12965633 (-)
vipb LOC107557425,LOC107657966,LOC107680498,LOC107713001,LOC107741995,LOC107552401 other upstream 268399 12984373 ~ 12989957 (-)
ccl25b LOC107680477 other upstream 633962 13349936 ~ 13394008 (-)

Expression


Co-expression Network