XLOC_006619


Basic Information

Item Value
gene id XLOC_006619
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 24590420 ~ 24623225 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013788
GCTAAGGAGAGCAGGGGCTGATAGCCTGACATCAGCTTCTTCCAGCCGTACGGAGGTAAGCACACAGTCACGGCGGTGAGAAAAGGAGAATGTTTTCTGCCTGCGAGGCTTTTGCTGATGCACTGACTGGAATAAACTCTGCATGCGAGGAACTCAGGTGCCACACATTTCCTGTGCCCAAAGCTTTTAGCAACAGCCTTTTCCAGGTGAAAGCAAGACTGTGACTCGAGCCGTGAGTAAACATCATCTCTCTCTTGATCCTGCAATAAGCCCAGTAATGAGGCCAAGTACTTGGCATTAAGATCACAGAGAGCTCGTCTTCCTTCAGTCTCACGCCGCACAGTCAGACGCCGTTCGCCACTGCacacacttcttttttttcctccttgACTCAGTTTTGTGGGAGATGAGAACGTCTGCACGGGTGCCGTTAGTCACTATGGGATAGCAATTGGGTTTACAATAGGGGCTTTCTGAACAAACATGATGCTGTGAGGCCTGTCACGCAGCCATTTTTACAACGTGAATCAACACAGATCAATGTCTTGCAGGCCTTTTGATGCACTATAGTTGCAATTGATTAATTGCAGTTGTTTGTCCTCACCACTACACAATTACAGGTTTGTGTTTAactgtacttgcatcaaaaattattcattattcatacaCCACTGCAGcaatacaaaacattttta

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013788 True 695 lncRNA 0.46 2 24590420 24623225

Neighbor

gene id symbol gene type direction distance location
XLOC_006618 AL831745.1 coding downstream 2200 24585224 ~ 24588220 (-)
XLOC_006617 NA coding downstream 12398 24577265 ~ 24578022 (-)
XLOC_006616 NA coding downstream 15674 24573086 ~ 24574746 (-)
XLOC_006615 slc1a4 coding downstream 142142 24429918 ~ 24448278 (-)
XLOC_006614 cep68 coding downstream 161325 24421515 ~ 24429095 (-)
XLOC_006621 znf511 coding upstream 42109 24665334 ~ 24669258 (-)
XLOC_006622 erlin1 coding upstream 78181 24701406 ~ 24717618 (-)
XLOC_006623 sfr1 coding upstream 119499 24742724 ~ 24745288 (-)
XLOC_006624 slka coding upstream 157963 24781188 ~ 24826607 (-)
XLOC_006625 AL929334.1 coding upstream 207512 24830737 ~ 24870285 (-)
XLOC_006471 BX537274.2 misc downstream 14325515 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 23764195 825904 ~ 826225 (-)
XLOC_006611 NA non-coding downstream 238877 24346989 ~ 24351543 (-)
XLOC_006607 CR762497.1 non-coding downstream 304030 24283670 ~ 24286390 (-)
XLOC_006629 NA non-coding upstream 586933 25210158 ~ 25284716 (-)
XLOC_006633 BX005252.1 non-coding upstream 907309 25530534 ~ 25530648 (-)
XLOC_006640 NA non-coding upstream 1153164 25776389 ~ 25778815 (-)
XLOC_006643 NA non-coding upstream 1223307 25846532 ~ 25853311 (-)
XLOC_006644 NA non-coding upstream 1386272 26009497 ~ 26703804 (-)

Expression


Co-expression Network