LOC122354690


Basic Information

Item Value
gene id LOC122354690
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 3678762 ~ 3678926 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252141.1
ATACTTACCTGGCAGGGGAGACACCATGATCAAGACGGTGGTTCACCCAGGGCGAGGGTTGACCATTGCACTCCGGTTGTGCTGACCCAATGCGAATTCCCCAAATGTTTGAATCTCGACTGTGTAATTTATGGTAATGGGGGACTGCGTTCGCGCTCTCctctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252141.1 True 165 snRNA 0.53 1 3678762 3678926

Neighbor

gene id symbol gene type direction distance location
lhfpl5a lhfpl5a,LOC107592561,LOC107680427,LOC108435128,LOC108254808,LOC108246860 coding downstream 221828 3454410 ~ 3456934 (-)
si:ch211-160o17.6 LOC107699340,LOC107714505,LOC107555993 coding downstream 292971 3381485 ~ 3385791 (-)
pusl1 NA coding downstream 379700 3285961 ~ 3299062 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding downstream 414648 3256879 ~ 3264114 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding downstream 620332 3052696 ~ 3058430 (-)
LOC122353608 LOC107658808,LOC107568054,LOC107750169 coding upstream 4883 3683809 ~ 3688280 (-)
cdh27 LOC107654208,LOC107730486,LOC107568064 coding upstream 12234 3691160 ~ 3702206 (-)
si:ch211-253b8.5 si:ch211-253b8.5,LOC107653378,LOC107568061,LOC107592587,LOC107680420,LOC107730476 coding upstream 25646 3704572 ~ 3715578 (-)
bmp7a bmp7a,LOC107730480,LOC107657209,LOC107568055,LOC107751030,LOC107658719 coding upstream 54056 3732982 ~ 3742362 (-)
smim7 smim7,LOC107568062,LOC107703137,LOC107658516,LOC107592586 coding upstream 68567 3747493 ~ 3749711 (-)
G79010 NA non-coding downstream 21473 3654282 ~ 3657289 (-)
G78969 NA non-coding downstream 263838 3412874 ~ 3414924 (-)
G78919 NA non-coding downstream 411087 3266756 ~ 3267675 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding downstream 412090 3266184 ~ 3266672 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding downstream 437443 3223735 ~ 3241319 (-)
G79069 NA non-coding upstream 37763 3716689 ~ 3719414 (-)
G79075 tmem38a,LOC107730482,LOC107702305,LOC107658508,LOC107751025 non-coding upstream 74004 3752930 ~ 3759723 (-)
G79083 nwd1,LOC107710443,LOC107658741,LOC107592553,LOC107655543,LOC107730478 non-coding upstream 101073 3779999 ~ 3780317 (-)
G79126 NA non-coding upstream 430178 4109104 ~ 4112070 (-)
G79172 NA non-coding upstream 695722 4374648 ~ 4375393 (-)
G79003 NA other downstream 137707 3540001 ~ 3541055 (-)
cdab cda,LOC107714500,LOC107751011,LOC107572847,LOC107680435,LOC108436250,LOC105898129 other downstream 422550 3253863 ~ 3256212 (-)
G78853 gata2a,gata2,LOC107714496 other downstream 565070 3112933 ~ 3113692 (-)
spcs1 spcs1,LOC107566449,LOC107714491,LOC107680421,LOC107699355,LOC107744856,LOC107572401 other downstream 630538 3046738 ~ 3048224 (-)
trnai-aau_68 NA other downstream 692231 2986458 ~ 2986531 (-)
LOC122354343 cpne5b,LOC107680428,LOC107714485,LOC107555996,LOC107699334,LOC107751002,LOC108436414 other upstream 134579 3813505 ~ 3834923 (-)
G79085 zgc:113223,LOC107745344,LOC107698001,LOC107556176 other upstream 234322 3913248 ~ 3914635 (-)
si:dkey-197i20.6 si:dkey-197i20.6,LOC107745350,LOC107710445,LOC107658773,LOC107669007,LOC107592569 other upstream 283055 3961981 ~ 3965791 (-)
mmel1 mmel1,LOC107712974,LOC107756657,LOC107654428,LOC107702001,LOC107592889 other upstream 2060090 5739016 ~ 5765140 (-)
G79565 NA other upstream 2417207 6096133 ~ 6096480 (-)

Expression


Co-expression Network