trnac-gca_30


Basic Information

Item Value
gene id trnac-gca_30
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1113688 ~ 1113759 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1501
gggggtatagctcagtggtagagcatttgactgcagatcaagaggtccccggttcaaatccgggtgccccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1501 True 72 tRNA 0.57 1 1113688 1113759

Neighbor

gene id symbol gene type direction distance location
trnac-gca_29 NA coding downstream 142 1113476 ~ 1113546 (-)
trnac-gca_28 NA coding downstream 363 1113254 ~ 1113325 (-)
trnac-gca_27 NA coding downstream 577 1113041 ~ 1113111 (-)
trnac-gca_26 NA coding downstream 789 1112828 ~ 1112899 (-)
trnac-gca_25 NA coding downstream 996 1112621 ~ 1112692 (-)
trnac-gca_31 NA coding upstream 137 1113896 ~ 1113967 (-)
trnac-gca_32 NA coding upstream 1412 1115171 ~ 1115243 (-)
trnac-gca_33 NA coding upstream 1863 1115622 ~ 1115693 (-)
trnac-gca_34 NA coding upstream 2302 1116061 ~ 1116131 (-)
trnac-gca_35 NA coding upstream 2738 1116497 ~ 1116568 (-)
G78338 NA non-coding downstream 39232 1072546 ~ 1074456 (-)
G78331 NA non-coding downstream 61144 1050078 ~ 1052544 (-)
G78327 mkrn2,LOC107675967,LOC107571211,LOC107571213,LOC107742032 non-coding downstream 63752 1049406 ~ 1049936 (-)
G78324 pparg non-coding downstream 89878 1021476 ~ 1023810 (-)
G78298 NA non-coding downstream 206114 905807 ~ 907574 (-)
G78354 NA non-coding upstream 54563 1168322 ~ 1168814 (-)
G78373 NA non-coding upstream 90117 1203876 ~ 1204107 (-)
G78378 LOC107730614,LOC107551316,LOC107654797,LOC107722003 non-coding upstream 98517 1212276 ~ 1213265 (-)
G78410 NA non-coding upstream 167973 1281732 ~ 1284944 (-)
G78413 NA non-coding upstream 173534 1287293 ~ 1298959 (-)
LOC122353728 NA other downstream 138901 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 319552 599107 ~ 794136 (-)
G78170 NA other downstream 657690 453134 ~ 455998 (-)
G78144 alas1 other downstream 664787 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 708277 402940 ~ 405411 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 103460 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 474945 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 590865 1704624 ~ 1716129 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 1699593 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 1705829 2819588 ~ 2830203 (-)

Expression


Co-expression Network