trnac-gca_57


Basic Information

Item Value
gene id trnac-gca_57
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1124508 ~ 1124579 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1528
gggggtatagctcagtggtagagcatttgactgcagatcaagaggtccccggttcaaatccgggtgccccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1528 True 72 tRNA 0.57 1 1124508 1124579

Neighbor

gene id symbol gene type direction distance location
trnac-gca_56 NA coding downstream 146 1124291 ~ 1124362 (-)
trnac-gca_55 NA coding downstream 794 1123643 ~ 1123714 (-)
trnac-gca_54 NA coding downstream 1456 1122981 ~ 1123052 (-)
trnac-gca_53 NA coding downstream 2965 1121472 ~ 1121543 (-)
trnac-gca_52 NA coding downstream 3186 1121251 ~ 1121322 (-)
trnac-gca_58 NA coding upstream 366 1124945 ~ 1125015 (-)
trnac-gca_59 NA coding upstream 585 1125164 ~ 1125234 (-)
trnac-gca_60 NA coding upstream 1454 1126033 ~ 1126103 (-)
trnac-gca_61 NA coding upstream 1670 1126249 ~ 1126320 (-)
trnac-gca_62 NA coding upstream 1891 1126470 ~ 1126541 (-)
G78338 NA non-coding downstream 50052 1072546 ~ 1074456 (-)
G78331 NA non-coding downstream 71964 1050078 ~ 1052544 (-)
G78327 mkrn2,LOC107675967,LOC107571211,LOC107571213,LOC107742032 non-coding downstream 74572 1049406 ~ 1049936 (-)
G78324 pparg non-coding downstream 100698 1021476 ~ 1023810 (-)
G78298 NA non-coding downstream 216934 905807 ~ 907574 (-)
G78354 NA non-coding upstream 43743 1168322 ~ 1168814 (-)
G78373 NA non-coding upstream 79297 1203876 ~ 1204107 (-)
G78378 LOC107730614,LOC107551316,LOC107654797,LOC107722003 non-coding upstream 87697 1212276 ~ 1213265 (-)
G78410 NA non-coding upstream 157153 1281732 ~ 1284944 (-)
G78413 NA non-coding upstream 162714 1287293 ~ 1298959 (-)
LOC122353728 NA other downstream 149721 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 330372 599107 ~ 794136 (-)
G78170 NA other downstream 668510 453134 ~ 455998 (-)
G78144 alas1 other downstream 675607 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 719097 402940 ~ 405411 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 92640 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 464125 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 580045 1704624 ~ 1716129 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 1688773 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 1695009 2819588 ~ 2830203 (-)

Expression


Co-expression Network