trnac-gca_61


Basic Information

Item Value
gene id trnac-gca_61
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1126249 ~ 1126320 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1532
gggggtatagctcagtggtagagcatttgactgcagatcaagaggtccccggttcaaatccgggtgccccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1532 True 72 tRNA 0.57 1 1126249 1126320

Neighbor

gene id symbol gene type direction distance location
trnac-gca_60 NA coding downstream 146 1126033 ~ 1126103 (-)
trnac-gca_59 NA coding downstream 1015 1125164 ~ 1125234 (-)
trnac-gca_58 NA coding downstream 1234 1124945 ~ 1125015 (-)
trnac-gca_57 NA coding downstream 1670 1124508 ~ 1124579 (-)
trnac-gca_56 NA coding downstream 1887 1124291 ~ 1124362 (-)
trnac-gca_62 NA coding upstream 150 1126470 ~ 1126541 (-)
trnac-gca_63 NA coding upstream 597 1126917 ~ 1126987 (-)
trnac-gca_64 NA coding upstream 1032 1127352 ~ 1127423 (-)
trnac-gca_65 NA coding upstream 1252 1127572 ~ 1127642 (-)
trnac-gca_66 NA coding upstream 1673 1127993 ~ 1128063 (-)
G78338 NA non-coding downstream 51793 1072546 ~ 1074456 (-)
G78331 NA non-coding downstream 73705 1050078 ~ 1052544 (-)
G78327 mkrn2,LOC107675967,LOC107571211,LOC107571213,LOC107742032 non-coding downstream 76313 1049406 ~ 1049936 (-)
G78324 pparg non-coding downstream 102439 1021476 ~ 1023810 (-)
G78298 NA non-coding downstream 218675 905807 ~ 907574 (-)
G78354 NA non-coding upstream 42002 1168322 ~ 1168814 (-)
G78373 NA non-coding upstream 77556 1203876 ~ 1204107 (-)
G78378 LOC107730614,LOC107551316,LOC107654797,LOC107722003 non-coding upstream 85956 1212276 ~ 1213265 (-)
G78410 NA non-coding upstream 155412 1281732 ~ 1284944 (-)
G78413 NA non-coding upstream 160973 1287293 ~ 1298959 (-)
LOC122353728 NA other downstream 151462 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 332113 599107 ~ 794136 (-)
G78170 NA other downstream 670251 453134 ~ 455998 (-)
G78144 alas1 other downstream 677348 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 720838 402940 ~ 405411 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 90899 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 462384 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 578304 1704624 ~ 1716129 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 1687032 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 1693268 2819588 ~ 2830203 (-)

Expression


Co-expression Network