trnac-gca_82


Basic Information

Item Value
gene id trnac-gca_82
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1139998 ~ 1140068 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1553
tggggtatagctcagtggtagagcatttgactgcagatcaagaggtcccggttcaaatccgggtgcccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1553 True 71 tRNA 0.56 1 1139998 1140068

Neighbor

gene id symbol gene type direction distance location
trnac-gca_81 NA coding downstream 779 1139148 ~ 1139219 (-)
trnac-gca_80 NA coding downstream 2127 1137800 ~ 1137871 (-)
trnac-gca_79 NA coding downstream 2570 1137357 ~ 1137428 (-)
trnac-gca_78 NA coding downstream 3443 1136484 ~ 1136555 (-)
trnac-gca_77 NA coding downstream 6086 1133841 ~ 1133912 (-)
trnac-gca_83 NA coding upstream 1013 1141081 ~ 1141152 (-)
trnac-gca_84 NA coding upstream 2559 1142627 ~ 1142697 (-)
trnac-gca_85 NA coding upstream 2781 1142849 ~ 1142919 (-)
trnac-gca_86 NA coding upstream 4317 1144385 ~ 1144456 (-)
trnac-gca_87 NA coding upstream 4959 1145027 ~ 1145098 (-)
G78338 NA non-coding downstream 65542 1072546 ~ 1074456 (-)
G78331 NA non-coding downstream 87454 1050078 ~ 1052544 (-)
G78327 mkrn2,LOC107675967,LOC107571211,LOC107571213,LOC107742032 non-coding downstream 90062 1049406 ~ 1049936 (-)
G78324 pparg non-coding downstream 116188 1021476 ~ 1023810 (-)
G78298 NA non-coding downstream 232424 905807 ~ 907574 (-)
G78354 NA non-coding upstream 28254 1168322 ~ 1168814 (-)
G78373 NA non-coding upstream 63808 1203876 ~ 1204107 (-)
G78378 LOC107730614,LOC107551316,LOC107654797,LOC107722003 non-coding upstream 72208 1212276 ~ 1213265 (-)
G78410 NA non-coding upstream 141664 1281732 ~ 1284944 (-)
G78413 NA non-coding upstream 147225 1287293 ~ 1298959 (-)
LOC122353728 NA other downstream 165211 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 345862 599107 ~ 794136 (-)
G78170 NA other downstream 684000 453134 ~ 455998 (-)
G78144 alas1 other downstream 691097 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 734587 402940 ~ 405411 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 77151 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 448636 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 564556 1704624 ~ 1716129 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 1673284 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 1679520 2819588 ~ 2830203 (-)

Expression


Co-expression Network