trnac-gca_102


Basic Information

Item Value
gene id trnac-gca_102
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1158113 ~ 1158184 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1574
gggggtatagctcagtggtagagcatttgactgcagatcaagaggtccccggttcaaatccaGGTGCCCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1574 True 72 tRNA 0.54 1 1158113 1158184

Neighbor

gene id symbol gene type direction distance location
trnac-gca_101 NA coding downstream 166 1157877 ~ 1157947 (-)
trnac-gca_100 NA coding downstream 388 1157654 ~ 1157725 (-)
trnac-gca_99 NA coding downstream 1695 1156347 ~ 1156418 (-)
trnac-gca_98 NA coding downstream 1912 1156130 ~ 1156201 (-)
trnac-gca_97 NA coding downstream 3652 1154391 ~ 1154461 (-)
trnac-gca_103 NA coding upstream 365 1158549 ~ 1158620 (-)
trnac-gca_104 NA coding upstream 800 1158984 ~ 1159055 (-)
trnac-gca_105 NA coding upstream 1009 1159193 ~ 1159263 (-)
trnac-gca_106 NA coding upstream 1229 1159413 ~ 1159483 (-)
trnac-gca_107 NA coding upstream 1660 1159844 ~ 1159915 (-)
G78338 NA non-coding downstream 83657 1072546 ~ 1074456 (-)
G78331 NA non-coding downstream 105569 1050078 ~ 1052544 (-)
G78327 mkrn2,LOC107675967,LOC107571211,LOC107571213,LOC107742032 non-coding downstream 108177 1049406 ~ 1049936 (-)
G78324 pparg non-coding downstream 134303 1021476 ~ 1023810 (-)
G78298 NA non-coding downstream 250539 905807 ~ 907574 (-)
G78354 NA non-coding upstream 10138 1168322 ~ 1168814 (-)
G78373 NA non-coding upstream 45692 1203876 ~ 1204107 (-)
G78378 LOC107730614,LOC107551316,LOC107654797,LOC107722003 non-coding upstream 54092 1212276 ~ 1213265 (-)
G78410 NA non-coding upstream 123548 1281732 ~ 1284944 (-)
G78413 NA non-coding upstream 129109 1287293 ~ 1298959 (-)
LOC122353728 NA other downstream 183326 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 363977 599107 ~ 794136 (-)
G78170 NA other downstream 702115 453134 ~ 455998 (-)
G78144 alas1 other downstream 709212 443885 ~ 448901 (-)
LOC122353669 mettl21b,LOC107684011 other downstream 752702 402940 ~ 405411 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other upstream 59035 1217219 ~ 1260090 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other upstream 430520 1588704 ~ 1696787 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other upstream 546440 1704624 ~ 1716129 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 1655168 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 1661404 2819588 ~ 2830203 (-)

Expression


Co-expression Network