trnap-agg_19


Basic Information

Item Value
gene id trnap-agg_19
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1876619 ~ 1876689 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1619
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1619 True 71 tRNA 0.61 1 1876619 1876689

Neighbor

gene id symbol gene type direction distance location
trnaq-cug_16 NA coding upstream 353 1876195 ~ 1876266 (+)
trnas-gcu_26 NA coding upstream 909 1875629 ~ 1875710 (+)
LOC122354696 NA coding upstream 1119 1875394 ~ 1875500 (+)
trnas-gcu_25 NA coding upstream 2317 1874221 ~ 1874302 (+)
trnap-agg_18 NA coding upstream 2540 1874009 ~ 1874079 (+)
trnas-gcu_27 NA coding downstream 142 1876831 ~ 1876914 (+)
LOC122354697 NA coding downstream 1332 1878021 ~ 1878127 (+)
odad1 LOC107699332,LOC107592901,LOC107750999,LOC107752162,LOC107654176,LOC107550522 coding downstream 66973 1943662 ~ 1949355 (+)
fhit fhit,LOC107699359,LOC107654179 coding downstream 303774 2180463 ~ 2417458 (+)
si:ch211-236d3.4 si:ch211-236d3.4,LOC107570538,LOC107699358,LOC107706914,LOC107724804,LOC107703113 coding downstream 789819 2666508 ~ 2676482 (+)
G78625 NA non-coding upstream 74306 1801351 ~ 1802313 (+)
G78540 NA non-coding upstream 110030 1766371 ~ 1766589 (+)
G78517 NA non-coding upstream 206924 1669022 ~ 1669695 (+)
G78490 NA non-coding upstream 301494 1572594 ~ 1575125 (+)
G78484 NA non-coding upstream 313963 1558860 ~ 1562656 (+)
G78652 LOC107550538,LOC107697642 non-coding downstream 22044 1898733 ~ 1899063 (+)
G78674 NA non-coding downstream 60171 1936860 ~ 1939086 (+)
G78757 NA non-coding downstream 611525 2488214 ~ 2488553 (+)
G78772 NA non-coding downstream 823706 2700395 ~ 2700703 (+)
G78784 NA non-coding downstream 935688 2812377 ~ 2813282 (+)
G78506 inpp1,LOC107737355,LOC107683640,LOC107730897 other upstream 150522 1644631 ~ 1726097 (+)
nabp2 si:ch73-190f16.2,nabp2,LOC107572067,LOC107557546,LOC107683643,LOC107675336,LOC107737367,LOC106565411 other upstream 195419 1678226 ~ 1681200 (+)
G78500 NA other upstream 283494 1590744 ~ 1593125 (+)
rargb LOC107730622,LOC107681487,LOC107551317,LOC107681495,LOC107754558,LOC107557540,LOC108424631,LOC105907526 other upstream 358656 1485707 ~ 1517963 (+)
rbms2a rbms2,LOC107730618,LOC108424578,LOC107654803,LOC107565002,LOC107709509,LOC102312407,LOC107681488,LOC107551328 other upstream 427659 1419520 ~ 1448960 (+)
G78763 NA other downstream 801446 2678135 ~ 2680142 (+)
G78790 NA other downstream 948850 2825539 ~ 2826794 (+)
camk2n1 si:dkey-33m11.6,LOC107572850,LOC107680422,LOC107555994,LOC107751034,LOC107714486,LOC107699327 other downstream 1393510 3270199 ~ 3272619 (+)
LOC122353713 LOC107714487,LOC107555999 other downstream 1481521 3358210 ~ 3361658 (+)
tmem167b tmem167b,LOC107592590,LOC107555997,LOC107699326 other downstream 1509569 3386258 ~ 3391229 (+)

Expression


Co-expression Network