G18


Basic Information

Item Value
gene id G18
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 25075 ~ 25671 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21
CAAACAAACACCCCTCTCTTCATTGCTCCGCCTCCAAAACTCACACTCCAATCCTAACCACCCTGCTGCGAGTCGGTAGTTTACCTGCAAAACTCTCACTATCTAGCTACTGTTACATGTGTAATGAGAGTGGATCTCTGTTTATCACAGCTGATGCGAAACAAAATGCTTCACCAAAAATAAAGCGCAGTTGATGAACGAACGACAAGGAAGCACAAAAAATGAACATACAGTACACAAGAGTAAATACAAACAATAGTTTCTTGTTAATCACAAACAATTTTGCTTAAACCATCAAAATATGAGGAAAATATTTTTTTATTTTTATATTATTTAAATGTTTTAAAATATGACATTGACTACAACGTAATCAATTTTTAATATTTAATTCAAATATTTAAAAAAATGTGTTAAAAGATATAAGCATATTGTGTAGCTGTGCTTGGAGTCAATTGTTTCATGTGTGATAATGAAATGAAATTTCAAATTATTTCAAATTATTTTTGGCCAGGCTGTCATACAAATAAATTATGAACGCATGCAAAAACAAGAGAGAACCAATTAAGGTTGAAGATGTCAGTTTTTGTATGGCTTGAC
>TU20
TAATCAATTTTTAATATTTAATTCAAATATTTAAAAAAATGTGTTAAAAGATATAAGCATATTGTGTAGCTGTGCTTGGAGTCAATTGTTTCATGTGTGATAATGAAATGAAATTTCAAATTATTTCAAATTATTTTTGGCCAGGCTGTCATACAAATAAATTATGAACGCATGCAAAAACAAGAGAGAACCAATTAAGGTTGAAGATGTCAGTTTTTGTATGGCTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21 False 597 lncRNA 0.44 1 25075 25671
TU20 True 230 lncRNA 0.37 1 25442 25671

Neighbor

gene id symbol gene type direction distance location
CI01000000_00050357_00064104 NA coding downstream 24326 49997 ~ 64310 (+)
CI01000000_00084533_00088200 NA coding downstream 58615 84286 ~ 89204 (+)
CI01000000_00108218_00111090 NA coding downstream 82291 107962 ~ 111210 (+)
CI01000000_00112199_00115163 NA coding downstream 85858 111529 ~ 115356 (+)
CI01000000_00119500_00121099 NA coding downstream 92878 118549 ~ 121314 (+)
G14 NA non-coding upstream 500 24122 ~ 24575 (+)
G13 NA non-coding upstream 1691 22563 ~ 23384 (+)
G16 NA non-coding upstream 2995 21713 ~ 22080 (+)
G10 NA non-coding upstream 6855 17172 ~ 18220 (+)
G20 NA non-coding downstream 421 26092 ~ 26365 (+)
G19 NA non-coding downstream 1021 26692 ~ 27634 (+)
G72 NA non-coding downstream 118198 143869 ~ 144150 (+)
G73 NA non-coding downstream 118725 144396 ~ 144612 (+)
G252 NA other downstream 477538 503209 ~ 507072 (+)
G350 NA other downstream 646171 671842 ~ 676937 (+)
G435 NA other downstream 1399450 1425121 ~ 1432854 (+)
G579 NA other downstream 1789782 1767917 ~ 1908808 (+)
G2774 NA other downstream 4428107 4453778 ~ 4454232 (+)

Expression


Co-expression Network