trnaf-gaa_3



Basic Information


Item Value
gene id trnaf-gaa_3
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2703395 ~ 2703472 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>unassigned_transcript_1624
gccgaaatagctcagttgggagagcgttagactgaagatctaaaggtccctggttcgatcccggtttcgcagttggcg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1624 True 78 tRNA 0.54 1 2703395 2703472

Neighbor


gene id symbol gene type direction distance location
trnap-ugg_6 NA coding downstream 528 2702796 ~ 2702867 (-)
trnaf-gaa_2 NA coding downstream 1510 2701808 ~ 2701885 (-)
trnap-cgg_2 NA coding downstream 2116 2701208 ~ 2701279 (-)
ptprga ptprga,ptprg,LOC107699324,LOC107752167,LOC107654175,LOC106583020 coding downstream 527467 1966493 ~ 2175928 (-)
cse1l cse1l,LOC107699361,LOC107750990,LOC107654178,LOC107752166 coding downstream 739785 1953550 ~ 1963610 (-)
trnai-aau_3 NA coding upstream 87 2703559 ~ 2703632 (-)
trnaf-gaa_4 NA coding upstream 1490 2704962 ~ 2705039 (-)
trnai-aau_4 NA coding upstream 1662 2705134 ~ 2705207 (-)
trnap-cgg_3 NA coding upstream 2464 2705936 ~ 2706007 (-)
trnaf-gaa_5 NA coding upstream 3068 2706540 ~ 2706612 (-)
G78773 NA non-coding downstream 2666 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 5923 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 6698 2696409 ~ 2696697 (-)
G78756 NA non-coding downstream 215559 2487484 ~ 2487836 (-)
LOC122354525 NA non-coding downstream 218467 2483670 ~ 2484928 (-)
G78774 NA non-coding upstream 91550 2795022 ~ 2795296 (-)
LOC122354391 NA non-coding upstream 96061 2799533 ~ 2800028 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 375542 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 410825 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 520263 3223735 ~ 3241319 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other downstream 987266 1704624 ~ 1716129 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other downstream 1006608 1588704 ~ 1696787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other downstream 1443305 1217219 ~ 1260090 (-)
LOC122353728 NA other downstream 1728608 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 1909259 599107 ~ 794136 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 109880 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 116116 2819588 ~ 2830203 (-)
trnaf-gaa_29 NA other upstream 133811 2837283 ~ 2837354 (-)
trnap-ugg_7 NA other upstream 134769 2838241 ~ 2838312 (-)
trnaf-gaa_30 NA other upstream 135375 2838847 ~ 2838919 (-)

Expression



Co-expression Network