trnaf-gaa_17


Basic Information

Item Value
gene id trnaf-gaa_17
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2764854 ~ 2764931 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1656
gccgaaatagctcagttgggagagcgttagactgaagatctaaaggtccctggttcgatcccggtttcgcagttggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1656 True 78 tRNA 0.54 1 2764854 2764931

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa_16 NA coding downstream 1483 2763294 ~ 2763371 (-)
trnai-aau_16 NA coding downstream 2877 2761905 ~ 2761977 (-)
trnaf-gaa_15 NA coding downstream 3040 2761737 ~ 2761814 (-)
trnai-aau_15 NA coding downstream 4443 2760339 ~ 2760411 (-)
trnaf-gaa_14 NA coding downstream 4602 2760180 ~ 2760252 (-)
trnai-aau_17 NA coding upstream 86 2765017 ~ 2765090 (-)
trnaf-gaa_18 NA coding upstream 1478 2766409 ~ 2766486 (-)
trnai-aau_18 NA coding upstream 1641 2766572 ~ 2766644 (-)
trnaf-gaa_19 NA coding upstream 3033 2767964 ~ 2768041 (-)
trnai-aau_19 NA coding upstream 3195 2768126 ~ 2768197 (-)
G78773 NA non-coding downstream 64125 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 67382 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 68157 2696409 ~ 2696697 (-)
G78756 NA non-coding downstream 277018 2487484 ~ 2487836 (-)
LOC122354525 NA non-coding downstream 279926 2483670 ~ 2484928 (-)
G78774 NA non-coding upstream 30091 2795022 ~ 2795296 (-)
LOC122354391 NA non-coding upstream 34602 2799533 ~ 2800028 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 314083 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 349366 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 458804 3223735 ~ 3241319 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other downstream 1048725 1704624 ~ 1716129 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other downstream 1068067 1588704 ~ 1696787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other downstream 1504764 1217219 ~ 1260090 (-)
LOC122353728 NA other downstream 1790067 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 1970718 599107 ~ 794136 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 48421 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 54657 2819588 ~ 2830203 (-)
trnaf-gaa_29 NA other upstream 72352 2837283 ~ 2837354 (-)
trnap-ugg_7 NA other upstream 73310 2838241 ~ 2838312 (-)
trnaf-gaa_30 NA other upstream 73916 2838847 ~ 2838919 (-)

Expression


Co-expression Network