G19


Basic Information

Item Value
gene id G19
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 26692 ~ 27634 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU26
TAACGGTCAGTTGGAAGGTCAATGAACTGCCATAGAGTAGTGGCTAAATGTGATGTCCAACCATATGAAAATGGACATCTTCAACCTTAATTCAAATATTTTTAAAAATGTGTTAAAAGATGTAAGCATATTGTGTAGCTGTGCTTGGAGTCAATTGTGTCATGTGTGATAATGAAATGAAATTTCAAATTATTTCAAATTATTTTTGGTGAGGCTATCATGCAAAGTAATTATGAACACATGCAAAAACAAGAGAGAACCAATGAAATATTAAAAACTGATTATGTTGTAGTCAATG
>TU24
TGTGATGTCCAACCATATGAAAATGGACATCTTCAACCTTAATTCAAATATTTTTAAAAATGTGTTAAAAGATGTAAGCATATTGTGTAGCTGTGCTTGGAGTCAATTGTGTCATGTGTGATAATGAAATGAAATTTCAAATTATTTCAAATTATTTTTGGTGAGGCTATCATGCAAAGTAATTATGAACACATGCAAAAACAAGAGAGAACCAATGAAATATTAAAAACTGATTATGTTGTAGTCAATGTCATATTTTAAGACATTTAAATAATATAAACAAAAATATTTTCATATTTTGATGGTTTAAGCAAAACTGTAGGGTCATTTAAAAAAAAAAAAAAAAAAAACTTTGCACATCAATTTTGGCCACTATGTTTGGTATGGTAAGTTTACACAATACTAAAGAGCTCAAAATAATATCACTGCAATGAAGGCTTATGACTGGGCAAGCGCTTTAGGACCACGTTTATATTAGAAAAGCTTTCCAGTGCTGGAGAGAGCTAAGCAGGAAGGCCTGAAAACAGATGAGGAGGCTGCTTTGATTCCTTCTCATGTAAGTAACACTGGGTTTGATTGTCTGGAGCTGCTGTTCTGTTGGCGATTAACAACAAACT
>TU22
TAAAAAAAAAAAAAAAAAAAACTTTGCACATCAATTTTGGCCACTATGTTTGGTATGGTAAGTTTACACAATACTAAAGAGCTCAAAATAATATCACTGCAATGAAGGCTTATGACTGGGCAAGCGCTTTAGGACCACGTTTATATTAGAAAAGCTTTCCAGTGCTGGAGAGAGCTAAGCAGGAAGGCCTGAAAACAGATGAGGAGGCTGCTTTGATTCCTTCTCATGTAAGTAACACTGGGTTTGATTGTCTGGAGCTGCTGTTCTGTTGGCGATTAACAACAAACT
>TU25
TAAAAAAAAAAAAAAAAAAAACTTTGCACATCAATTTTGGCCACTATGTTTGGTATGGTAAGTTTACACAATACTAAAGAGCTCAAAATAATATCACTGCAATGAAGGCTTATGACTGGGCAAGCGCTTTAGGACCACGTTTATATTAGAAAAGCTTTCCAGTGCTGGAGAGAGCTAAGCAGGAAGGCCTGAAAACAGATGAGGAGGCTGCTTTGATTCCTTCTCATGTAAGTAACACTGGGTTTGATTGTCTGGAGCTGCTGTTCTGTTGGCGATTAACAACAAACTCTTGTTTGTATTTACTCTCGTGTACTGTACGTTAATTTTTTGTGCTTCCTTGTCGTTCGTTCATCATCTGCGCTTTATTTTTCGTGAAGCATTTTGTTGCACGTCAGTATTGCGTGTGTAACAGTGGCCAGATAGTGAGAGTTGTGCAGTTAAACTACTGCACACTGACGCCCACTAGAACATGAGGTGTTTAGTGTCATTGTTAGTGCACTCGCCTCGCATGCCAGCAGCGTTCGGGCCAGGGTTCGAGACCGACTTGGAGCAGGGTGGTTAGTATT

Function

NR:

description
PREDICTED: suprabasin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26 False 298 lncRNA 0.38 1 26692 26989
TU24 False 617 lncRNA 0.42 1 26740 27356
TU22 False 288 lncRNA 0.38 1 27069 27356
TU25 True 566 lncRNA 0.39 1 27069 27634

Neighbor

gene id symbol gene type direction distance location
CI01000000_00050357_00064104 NA coding downstream 22363 49997 ~ 64310 (+)
CI01000000_00084533_00088200 NA coding downstream 56652 84286 ~ 89204 (+)
CI01000000_00108218_00111090 NA coding downstream 80328 107962 ~ 111210 (+)
CI01000000_00112199_00115163 NA coding downstream 83895 111529 ~ 115356 (+)
CI01000000_00119500_00121099 NA coding downstream 90915 118549 ~ 121314 (+)
G20 NA non-coding upstream 327 26092 ~ 26365 (+)
G18 NA non-coding upstream 1021 25075 ~ 25671 (+)
G14 NA non-coding upstream 2117 24122 ~ 24575 (+)
G13 NA non-coding upstream 3308 22563 ~ 23384 (+)
G16 NA non-coding upstream 4612 21713 ~ 22080 (+)
G72 NA non-coding downstream 116235 143869 ~ 144150 (+)
G73 NA non-coding downstream 116762 144396 ~ 144612 (+)
G74 NA non-coding downstream 117206 144840 ~ 145103 (+)
G81 NA non-coding downstream 123082 150716 ~ 151207 (+)
G252 NA other downstream 475575 503209 ~ 507072 (+)
G350 NA other downstream 644208 671842 ~ 676937 (+)
G435 NA other downstream 1397487 1425121 ~ 1432854 (+)
G579 NA other downstream 1787819 1767917 ~ 1908808 (+)
G2774 NA other downstream 4426144 4453778 ~ 4454232 (+)

Expression


Co-expression Network