trnaf-gaa_25


Basic Information

Item Value
gene id trnaf-gaa_25
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2777300 ~ 2777378 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1671
gccgaaatagctcagttgggagagcgctagactgaagatctaaaggtccctggttcgatccccggtttcgcagttggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1671 True 79 tRNA 0.56 1 2777300 2777378

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa_24 NA coding downstream 1478 2775745 ~ 2775822 (-)
trnai-aau_23 NA coding downstream 2871 2774358 ~ 2774429 (-)
trnaf-gaa_23 NA coding downstream 3029 2774194 ~ 2774271 (-)
trnai-aau_22 NA coding downstream 4434 2772793 ~ 2772866 (-)
trnaf-gaa_22 NA coding downstream 4594 2772634 ~ 2772706 (-)
trnai-aau_24 NA coding upstream 96 2777474 ~ 2777546 (-)
trnai-aau_25 NA coding upstream 1654 2779032 ~ 2779105 (-)
trnai-aau_26 NA coding upstream 3229 2780607 ~ 2780680 (-)
trnaf-gaa_26 NA coding upstream 6191 2783569 ~ 2783646 (-)
trnai-aau_27 NA coding upstream 6355 2783733 ~ 2783806 (-)
G78773 NA non-coding downstream 76571 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 79828 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 80603 2696409 ~ 2696697 (-)
G78756 NA non-coding downstream 289464 2487484 ~ 2487836 (-)
LOC122354525 NA non-coding downstream 292372 2483670 ~ 2484928 (-)
G78774 NA non-coding upstream 17644 2795022 ~ 2795296 (-)
LOC122354391 NA non-coding upstream 22155 2799533 ~ 2800028 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 301636 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 336919 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 446357 3223735 ~ 3241319 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other downstream 1061171 1704624 ~ 1716129 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other downstream 1080513 1588704 ~ 1696787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other downstream 1517210 1217219 ~ 1260090 (-)
LOC122353728 NA other downstream 1802513 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 1983164 599107 ~ 794136 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 35974 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 42210 2819588 ~ 2830203 (-)
trnaf-gaa_29 NA other upstream 59905 2837283 ~ 2837354 (-)
trnap-ugg_7 NA other upstream 60863 2838241 ~ 2838312 (-)
trnaf-gaa_30 NA other upstream 61469 2838847 ~ 2838919 (-)

Expression


Co-expression Network