trnaf-gaa_28


Basic Information

Item Value
gene id trnaf-gaa_28
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2786710 ~ 2786787 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1679
gccgaaatagctcagttgggagagcgttagactgaagatctaaaggtccctggttcgatcccggtttcgcagttggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1679 True 78 tRNA 0.54 1 2786710 2786787

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa_27 NA coding downstream 1490 2785148 ~ 2785220 (-)
trnap-cgg_6 NA coding downstream 2096 2784543 ~ 2784614 (-)
trnai-aau_27 NA coding downstream 2904 2783733 ~ 2783806 (-)
trnaf-gaa_26 NA coding downstream 3064 2783569 ~ 2783646 (-)
trnai-aau_26 NA coding downstream 6030 2780607 ~ 2780680 (-)
trnai-aau_28 NA coding upstream 87 2786874 ~ 2786946 (-)
LOC122354490 gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding upstream 21197 2807984 ~ 2811364 (-)
camk1b LOC107714490,LOC107566450,LOC107680448,LOC107572399 coding upstream 209712 2996499 ~ 3037108 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding upstream 265909 3052696 ~ 3058430 (-)
LOC122354702 NA coding upstream 268910 3055697 ~ 3055773 (-)
G78773 NA non-coding downstream 85981 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 89238 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 90013 2696409 ~ 2696697 (-)
G78756 NA non-coding downstream 298874 2487484 ~ 2487836 (-)
LOC122354525 NA non-coding downstream 301782 2483670 ~ 2484928 (-)
G78774 NA non-coding upstream 8235 2795022 ~ 2795296 (-)
LOC122354391 NA non-coding upstream 12746 2799533 ~ 2800028 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 292227 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 327510 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 436948 3223735 ~ 3241319 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other downstream 1070581 1704624 ~ 1716129 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other downstream 1089923 1588704 ~ 1696787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other downstream 1526620 1217219 ~ 1260090 (-)
LOC122353728 NA other downstream 1811923 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 1992574 599107 ~ 794136 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 26565 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 32801 2819588 ~ 2830203 (-)
trnaf-gaa_29 NA other upstream 50496 2837283 ~ 2837354 (-)
trnap-ugg_7 NA other upstream 51454 2838241 ~ 2838312 (-)
trnaf-gaa_30 NA other upstream 52060 2838847 ~ 2838919 (-)

Expression


Co-expression Network