trnap-cgg_10


Basic Information

Item Value
gene id trnap-cgg_10
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2852290 ~ 2852361 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1691
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1691 True 72 tRNA 0.63 1 2852290 2852361

Neighbor

gene id symbol gene type direction distance location
LOC122354490 gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding downstream 40926 2807984 ~ 2811364 (-)
trnai-aau_28 NA coding downstream 65344 2786874 ~ 2786946 (-)
trnaf-gaa_28 NA coding downstream 65503 2786710 ~ 2786787 (-)
trnaf-gaa_27 NA coding downstream 67070 2785148 ~ 2785220 (-)
trnap-cgg_6 NA coding downstream 67676 2784543 ~ 2784614 (-)
camk1b LOC107714490,LOC107566450,LOC107680448,LOC107572399 coding upstream 144138 2996499 ~ 3037108 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding upstream 200335 3052696 ~ 3058430 (-)
LOC122354702 NA coding upstream 203336 3055697 ~ 3055773 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding upstream 404518 3256879 ~ 3264114 (-)
pusl1 NA coding upstream 433600 3285961 ~ 3299062 (-)
LOC122354391 NA non-coding downstream 52262 2799533 ~ 2800028 (-)
G78774 NA non-coding downstream 56994 2795022 ~ 2795296 (-)
G78773 NA non-coding downstream 151561 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 154818 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 155593 2696409 ~ 2696697 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 226653 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 261936 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 371374 3223735 ~ 3241319 (-)
G78903 NA non-coding upstream 378766 3231127 ~ 3232742 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding upstream 413823 3266184 ~ 3266672 (-)
trnap-cgg_9 NA other downstream 3037 2849182 ~ 2849253 (-)
trnap-cgg_8 NA other downstream 4607 2847611 ~ 2847683 (-)
trnaf-gaa_34 NA other downstream 7120 2845100 ~ 2845170 (-)
trnaf-gaa_33 NA other downstream 8683 2843536 ~ 2843607 (-)
trnaf-gaa_32 NA other downstream 10244 2841975 ~ 2842046 (-)
trnaf-gaa_35 NA other upstream 2085 2854446 ~ 2854517 (-)
trnap-cgg_11 NA other upstream 4604 2856965 ~ 2857037 (-)
trnaf-gaa_36 NA other upstream 5207 2857568 ~ 2857641 (-)
trnaf-gaa_37 NA other upstream 9888 2862249 ~ 2862319 (-)
trnap-cgg_12 NA other upstream 13955 2866316 ~ 2866386 (-)

Expression


Co-expression Network