trnaf-gaa_69


Basic Information

Item Value
gene id trnaf-gaa_69
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2960864 ~ 2960936 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1773
gctgaaatagctcagttgggagagcgttagactgaagatctaaaggtccctggttcgatcccgggtttcggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1773 True 73 tRNA 0.52 1 2960864 2960936

Neighbor

gene id symbol gene type direction distance location
LOC122354490 gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding downstream 149500 2807984 ~ 2811364 (-)
trnai-aau_28 NA coding downstream 173918 2786874 ~ 2786946 (-)
trnaf-gaa_28 NA coding downstream 174077 2786710 ~ 2786787 (-)
trnaf-gaa_27 NA coding downstream 175644 2785148 ~ 2785220 (-)
trnap-cgg_6 NA coding downstream 176250 2784543 ~ 2784614 (-)
camk1b LOC107714490,LOC107566450,LOC107680448,LOC107572399 coding upstream 35563 2996499 ~ 3037108 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding upstream 91760 3052696 ~ 3058430 (-)
LOC122354702 NA coding upstream 94761 3055697 ~ 3055773 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding upstream 295943 3256879 ~ 3264114 (-)
pusl1 NA coding upstream 325025 3285961 ~ 3299062 (-)
LOC122354391 NA non-coding downstream 160836 2799533 ~ 2800028 (-)
G78774 NA non-coding downstream 165568 2795022 ~ 2795296 (-)
G78773 NA non-coding downstream 260135 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 263392 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 264167 2696409 ~ 2696697 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 118078 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 153361 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 262799 3223735 ~ 3241319 (-)
G78903 NA non-coding upstream 270191 3231127 ~ 3232742 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding upstream 305248 3266184 ~ 3266672 (-)
trnaf-gaa_68 NA other downstream 1478 2959316 ~ 2959386 (-)
trnaf-gaa_67 NA other downstream 7717 2953076 ~ 2953147 (-)
trnaf-gaa_66 NA other downstream 9267 2951527 ~ 2951597 (-)
trnaf-gaa_65 NA other downstream 10825 2949969 ~ 2950039 (-)
trnap-cgg_20 NA other downstream 11428 2949365 ~ 2949436 (-)
trnaf-gaa_70 NA other upstream 1491 2962427 ~ 2962498 (-)
trnap-cgg_21 NA other upstream 2447 2963383 ~ 2963454 (-)
trnap-cgg_22 NA other upstream 3992 2964928 ~ 2964999 (-)
trnaf-gaa_71 NA other upstream 4595 2965531 ~ 2965603 (-)
trnaf-gaa_72 NA other upstream 6162 2967098 ~ 2967169 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnaf-gaa-395 NA coding NW_023493751.1 JAAXML020000463.1 205064 ~ 205136 (-)