trnap-cgg_21


Basic Information

Item Value
gene id trnap-cgg_21
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2963383 ~ 2963454 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1775
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1775 True 72 tRNA 0.63 1 2963383 2963454

Neighbor

gene id symbol gene type direction distance location
LOC122354490 gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding downstream 152019 2807984 ~ 2811364 (-)
trnai-aau_28 NA coding downstream 176437 2786874 ~ 2786946 (-)
trnaf-gaa_28 NA coding downstream 176596 2786710 ~ 2786787 (-)
trnaf-gaa_27 NA coding downstream 178163 2785148 ~ 2785220 (-)
trnap-cgg_6 NA coding downstream 178769 2784543 ~ 2784614 (-)
camk1b LOC107714490,LOC107566450,LOC107680448,LOC107572399 coding upstream 33045 2996499 ~ 3037108 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding upstream 89242 3052696 ~ 3058430 (-)
LOC122354702 NA coding upstream 92243 3055697 ~ 3055773 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding upstream 293425 3256879 ~ 3264114 (-)
pusl1 NA coding upstream 322507 3285961 ~ 3299062 (-)
LOC122354391 NA non-coding downstream 163355 2799533 ~ 2800028 (-)
G78774 NA non-coding downstream 168087 2795022 ~ 2795296 (-)
G78773 NA non-coding downstream 262654 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 265911 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 266686 2696409 ~ 2696697 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 115560 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 150843 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 260281 3223735 ~ 3241319 (-)
G78903 NA non-coding upstream 267673 3231127 ~ 3232742 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding upstream 302730 3266184 ~ 3266672 (-)
trnaf-gaa_70 NA other downstream 885 2962427 ~ 2962498 (-)
trnaf-gaa_69 NA other downstream 2447 2960864 ~ 2960936 (-)
trnaf-gaa_68 NA other downstream 3997 2959316 ~ 2959386 (-)
trnaf-gaa_67 NA other downstream 10236 2953076 ~ 2953147 (-)
trnaf-gaa_66 NA other downstream 11786 2951527 ~ 2951597 (-)
trnap-cgg_22 NA other upstream 1474 2964928 ~ 2964999 (-)
trnaf-gaa_71 NA other upstream 2077 2965531 ~ 2965603 (-)
trnaf-gaa_72 NA other upstream 3644 2967098 ~ 2967169 (-)
trnaf-gaa_73 NA other upstream 5187 2968641 ~ 2968711 (-)
trnap-cgg_23 NA other upstream 6148 2969602 ~ 2969673 (-)

Expression


Co-expression Network