trnaf-gaa_78


Basic Information

Item Value
gene id trnaf-gaa_78
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2980216 ~ 2980289 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1789
gccgaaatagctcagttgggagagcgttagactgaagatctaaaggtcccctggttcgatcccgggtttcggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1789 True 74 tRNA 0.54 1 2980216 2980289

Neighbor

gene id symbol gene type direction distance location
LOC122354490 gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding downstream 168852 2807984 ~ 2811364 (-)
trnai-aau_28 NA coding downstream 193270 2786874 ~ 2786946 (-)
trnaf-gaa_28 NA coding downstream 193429 2786710 ~ 2786787 (-)
trnaf-gaa_27 NA coding downstream 194996 2785148 ~ 2785220 (-)
trnap-cgg_6 NA coding downstream 195602 2784543 ~ 2784614 (-)
camk1b LOC107714490,LOC107566450,LOC107680448,LOC107572399 coding upstream 16210 2996499 ~ 3037108 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding upstream 72407 3052696 ~ 3058430 (-)
LOC122354702 NA coding upstream 75408 3055697 ~ 3055773 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding upstream 276590 3256879 ~ 3264114 (-)
pusl1 NA coding upstream 305672 3285961 ~ 3299062 (-)
LOC122354391 NA non-coding downstream 180188 2799533 ~ 2800028 (-)
G78774 NA non-coding downstream 184920 2795022 ~ 2795296 (-)
G78773 NA non-coding downstream 279487 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 282744 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 283519 2696409 ~ 2696697 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 98725 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 134008 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 243446 3223735 ~ 3241319 (-)
G78903 NA non-coding upstream 250838 3231127 ~ 3232742 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding upstream 285895 3266184 ~ 3266672 (-)
trnai-aau_64 NA other downstream 1341 2978802 ~ 2978875 (-)
trnaf-gaa_77 NA other downstream 1501 2978643 ~ 2978715 (-)
trnap-cgg_26 NA other downstream 2110 2978035 ~ 2978106 (-)
trnaf-gaa_76 NA other downstream 3073 2977071 ~ 2977143 (-)
trnap-cgg_25 NA other downstream 3663 2976482 ~ 2976553 (-)
trnai-aau_65 NA other upstream 87 2980376 ~ 2980449 (-)
trnap-cgg_27 NA other upstream 893 2981182 ~ 2981253 (-)
trnaf-gaa_79 NA other upstream 1499 2981788 ~ 2981860 (-)
trnai-aau_66 NA other upstream 1658 2981947 ~ 2982020 (-)
trnap-ugg_9 NA other upstream 2417 2982706 ~ 2982777 (-)

Expression


Co-expression Network