Gene
RNA
| Item | Value |
|---|---|
| gene id | G8222 |
| gene name | dnajb4,LOC107681825,LOC107599850,LOC107708915,LOC107566472,LOC107751861,LOC107690981 |
| gene type | non-coding |
| species | tiger barb (Puntius tetrazona) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 680687 ~ 782745 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| symbol | description |
|---|---|
| dnajb4 | Predicted to enable chaperone binding activity and unfolded protein binding activity. Predicted to be involved in chaperone cofactor-dependent protein refolding. Predicted to act upstream of or within protein folding. Predicted to be active in cytosol. Orthologous to human DNAJB4 (DnaJ heat shock protein family (Hsp40) member B4). |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU12329 | False | 1539 | lncRNA | 0.45 | 2 | 680687 | 684193 |
| TU12330 | True | 3954 | lncRNA | 0.35 | 2 | 680687 | 782745 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| txndc12 | txndc12,LOC107708672,LOC107681819,LOC107690994,LOC107599851,LOC107566463,LOC107739415 | coding | upstream | 13336 | 663791 ~ 667351 (+) |
| zmp:0000001127 | NA | coding | upstream | 18687 | 658757 ~ 662000 (+) |
| zgc:153615 | zgc:153615,LOC107747506,LOC107691014,LOC107708656,LOC107599852,LOC108430722,LOC103026425 | coding | upstream | 25906 | 648984 ~ 654781 (+) |
| LOC122325155 | selt1a,selenot,LOC107681817,LOC107708642,LOC106599070 | coding | upstream | 71520 | 605086 ~ 609167 (+) |
| LOC122325106 | pter,LOC107681810,LOC107599857 | coding | upstream | 115697 | 559979 ~ 564990 (+) |
| ak5 | ak5,LOC107681791,LOC107599844,LOC107703241 | coding | downstream | 93013 | 875758 ~ 952394 (+) |
| miga1 | miga1,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 | coding | downstream | 213092 | 995837 ~ 1006604 (+) |
| si:ch211-71m22.3 | NA | coding | downstream | 237002 | 1019747 ~ 1024763 (+) |
| LOC122357034 | LOC107599864,LOC107681686,LOC107708940 | coding | downstream | 244548 | 1027293 ~ 1032989 (+) |
| LOC122324991 | NA | coding | downstream | 252930 | 1035675 ~ 1039604 (+) |
| G8173 | NA | non-coding | upstream | 9124 | 668304 ~ 671563 (+) |
| LOC122328698 | NA | non-coding | upstream | 35761 | 643034 ~ 644926 (+) |
| LOC122325219 | NA | non-coding | upstream | 45921 | 634151 ~ 634766 (+) |
| G8151 | NA | non-coding | upstream | 76742 | 571029 ~ 603945 (+) |
| G8213 | gpt2l,LOC107599855,LOC107691046 | non-coding | upstream | 96339 | 583362 ~ 584348 (+) |
| G8394 | NA | non-coding | downstream | 397385 | 1180130 ~ 1186032 (+) |
| G8393 | dia1a,LOC107599840,LOC107681802,LOC107722302,LOC107565821,LOC107679841 | non-coding | downstream | 414682 | 1197427 ~ 1203014 (+) |
| G8451 | NA | non-coding | downstream | 599374 | 1382119 ~ 1382323 (+) |
| G8449 | NA | non-coding | downstream | 601147 | 1383892 ~ 1385986 (+) |
| G8469 | LOC107715522,LOC107681815,LOC108437516,LOC108267691 | non-coding | downstream | 624906 | 1407651 ~ 1425295 (+) |
| LOC122360757 | fam73b,miga2,miga1,LOC107599369,LOC107705989,LOC107675762,LOC107737175,LOC107661559,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 | other | upstream | 222942 | 447162 ~ 457745 (+) |
| LOC122325097 | fuz,LOC107708997,LOC107691039 | other | upstream | 435323 | 241451 ~ 245364 (+) |
| G8167 | NA | other | upstream | 457320 | 200092 ~ 223367 (+) |
| st6galnac5a | st6galnac5a,LOC107681827,LOC107708707,LOC107599846,LOC107751866 | other | downstream | 17187 | 799932 ~ 828405 (+) |
| ccdc39 | ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 | other | downstream | 614779 | 1397524 ~ 1408721 (+) |
| rc3h1b | LOC107681708,LOC107560775,LOC107722144 | other | downstream | 762028 | 1544773 ~ 1559774 (+) |
| LOC122360854 | si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 | other | downstream | 1120322 | 1903067 ~ 1910679 (+) |
| arl14 | arl14,LOC107722413,LOC107719289 | other | downstream | 1150767 | 1933512 ~ 1936759 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_015232 | NA | non-coding | NC_007113.7 | CM002886.2 | 9316319 ~ 9318279 (+) |
| grasscarp (Ctenopharyngodon idella) | G23696 | NA | non-coding | CI01000003 | null | 2115530 ~ 2116646 (-) |
