G9926 (LOC107563058,LOC107549254,LOC108267243)


Basic Information

Item Value
gene id G9926
gene name LOC107563058,LOC107549254,LOC108267243
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 6986301 ~ 6988113 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU14786
ggcatccggctgctgctgctgctcccaggcctcttttgccacgtccagcaggcctcgcggctgtcggccgaacagcaactcgaatggggtgaagccggtggaggcctggggcacctctcgcaccccgaagaggacgtaggggagcatctggtcccagtcccgtttgtcctcggagacaacccttctcaacatctgcttcagtgtctggttgaaccgctccacaagtccgtccgtctgggggtggtacactgaggtgcgcagctgctggatccgtagcagccggcagaggtcggccatcactcgggacatgaacggggtgccttggtcggtcagtatctccccgggtatccccactctggtggacagggtgaagagctcctgggcgatcgccttggcggtggctttgcggagtgggatggcttcggggtaccgggtggcgtagtccacgatcaccaggatgtgttcgtggccgcgggcagacctcggcagcgggcccaccagatccatcccgatgcgctcgaagggcacctcgattatgggcagcgggataagtggactagggggaggtggccggggcgaggtcttctggcactcggggcaggcctggcagaacagtttcacatctccgtcgagccccggccagtggaaacggtcccggatcctcttgatagtgttggcggccccgaggtgtccggccagtgggtgggcgtgggcgagctccaagatggtgtccactttccctcggggcaccaccaggagccgtttctcctcccccctccgctgggcgacacaatagagtaggccgttctccacaataaaatgggga
>TU14788
ctccagatggtcttcccaggtctccgagtgaatCACAAGGTCGTCGAGATAGGCTGCGGCGTACTGTTGGTGGGGTCGGAGTAAGATGTCCATTAGtctctggaaggtggctggtgccccgtgtagaccgaagggaagggaccggtattgccagtggccgccgggggtggagaaagccgtttttggcttggcttcctctgacagcggaacctgccagtatcctttggtgagatcgagggtggagatataccgggcccttccaagacgttccagcagttcgtctacacggggcatgggatatccgtcgaactcggagacctggttgagtcgccggtagtcattgcagaagcggagggtgccgtccggttttggaaccaggacgatggggctggaccacgggctcgtcgatggttcaatcacccccaacttcagcatttggtttacctcctcctcaatagctcgccgacgagcctcagggatccggtagggccgctgccggacgatgacgtcgggaggggtccggatctcgtgctggaggaggttagtctgcccgggcgtggacgagaacacatccgagaactgaccgaccaaatgttggagttccgtcttCTGTGCGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107563058

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14786 True 826 TUCP 0.64 1 6986301 6987126
TU14788 False 617 lncRNA 0.46 1 6987497 6988113

Neighbor

gene id symbol gene type direction distance location
dis3l2 dis3l2 coding downstream 341623 6600045 ~ 6644678 (-)
mier1b mier1b,LOC107751718,LOC107683747 coding downstream 395002 6531927 ~ 6591299 (-)
nyap2b LOC107721795,LOC107683688,LOC107570858 coding downstream 542992 6410721 ~ 6443309 (-)
cwc25 cwc25,LOC107562839,LOC107572154,LOC107707532,LOC107675249,LOC102792885 coding downstream 583322 6389647 ~ 6402979 (-)
cldn15la cldn15la,LOC107737418,LOC107550432,LOC107695160 coding downstream 1126389 5855125 ~ 5859912 (-)
tyw3 tyw3 coding upstream 92393 7080506 ~ 7084049 (-)
acot11a acot11,acot11a coding upstream 123023 7111136 ~ 7125664 (-)
mrpl37 mrpl37 coding upstream 163732 7151845 ~ 7156830 (-)
tceanc2 tceanc2 coding upstream 173129 7161242 ~ 7164222 (-)
glmna glmn,glmna coding upstream 182826 7170939 ~ 7176952 (-)
G9924 NA non-coding downstream 763 6985182 ~ 6985538 (-)
G9897 NA non-coding downstream 151658 6829434 ~ 6834643 (-)
G9888 NA non-coding downstream 295549 6690390 ~ 6690752 (-)
G9886 NA non-coding downstream 321499 6664427 ~ 6664802 (-)
G9885 NA non-coding downstream 336526 6649401 ~ 6649775 (-)
G9927 NA non-coding upstream 498 6988611 ~ 6988889 (-)
G9938 LOC101886504,LOC101886486,LOC101886427 non-coding upstream 50393 7038506 ~ 7042242 (-)
G9969 NA non-coding upstream 118068 7106181 ~ 7106426 (-)
G9970 NA non-coding upstream 118505 7106618 ~ 7106845 (-)
G9971 NA non-coding upstream 118798 7106911 ~ 7107138 (-)
G9894 NA other downstream 157299 6828490 ~ 6829002 (-)
G9891 NA other downstream 244128 6741683 ~ 6742173 (-)
LOC122327746 dlg1,LOC107738730,LOC108427717,LOC108271975,LOC107659037 other downstream 808197 6125113 ~ 6178104 (-)
si:ch1073-184j22.2 si:ch1073-184j22.2,LOC107705298,LOC107564252,LOC107653511,LOC108440875,LOC108280510 other downstream 1179676 5804216 ~ 5806625 (-)
G9573 foxq1,LOC107685281,LOC107745888,LOC107563088,LOC107724052,LOC107671726 other downstream 2100268 4805188 ~ 4886033 (-)
lhx8a lhx8,lhx8a,LOC107693563,LOC108436043 other upstream 21470 7009583 ~ 7013214 (-)
dipk1aa fam69a,fam69aa,LOC107716951,LOC107568082,LOC108436064,LOC107694372,LOC107743375,LOC108280758 other upstream 218429 7206542 ~ 7223739 (-)
G10170 kdm4ab,LOC107564389,LOC107700543,LOC107551714,LOC107684932,LOC107743373 other upstream 504093 7492206 ~ 7493844 (-)
G10178 NA other upstream 796355 7784468 ~ 7785154 (-)
G10196 NA other upstream 1082663 8070776 ~ 8071834 (-)

Expression


Co-expression Network