LOC122324999


Basic Information

Item Value
gene id LOC122324999
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7036056 ~ 7036498 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU14802
atgaccaAATTATTTTCGTTGTTTAtgggggacttttattttgaaacaaaatccGCTTTTCACAACGCACGGCGCTAAAGAGAAAAGGGGAATGGGAGAGTGAACGCTTCATTACGGCTTAAAACTTGTTCACGAAAGGGATGTAACAAGTTTATTTAGCAACCCCCCGAAAAGGCataagCTCTTACGGTGATTTCTGAAGACGAAagggaacagaaataaaagtctggAAACATCAGTAAAAGTTTCGGCCATCATTCGGACGGGTCCGCTACA
>XR_006247246.1
GGCTTTAATAagagttaattttaatttattttgtttggtgttgcctttgtaatatttaatgtttaatgaccaAATTATTTTCGTTGTTTAtgggggacttttattttgaaacaaaatccGCTTTTCACAACGCACGGCGCTAAAGAGAAAAGGGGAATGGGAGAGTGAACGCTTCATTACGGCTTAAAACTTGTTCACGAAAGGGATGTAACAAGTTTATTTAGCAACCCCCCGAAAAGGCataagCTCTTACGGTGATTTCTGAAGACGAAagggaacagaaataaaagtctggAAACATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14802 False 276 lncRNA 0.43 2 7036121 7036498
XR_006247246.1 True 303 lncRNA 0.36 2 7036056 7036460

Neighbor

gene id symbol gene type direction distance location
penka LOC107748924,LOC107675675,LOC107573453 coding upstream 62885 6970493 ~ 6973171 (+)
bpnt2 impad1,LOC107663252,LOC107741594 coding upstream 156407 6856244 ~ 6879649 (+)
LOC122361319 NA coding upstream 193963 6840626 ~ 6842093 (+)
slc35d1b slc35d1b,LOC107690965,LOC107573325,LOC107745697,LOC108415103 coding upstream 547356 6474022 ~ 6488700 (+)
fgf12a fgf12a,fgf12,LOC107549734,LOC108436038,LOC105006885,LOC108280711,LOC106598267,LOC106568709,LOC103365152 coding upstream 698484 6257551 ~ 6337572 (+)
cryz cryz,LOC107553670 coding downstream 47636 7084134 ~ 7098176 (+)
fam151a fam151a coding downstream 69713 7106211 ~ 7111272 (+)
ssbp3a ssbp3,ssbp3a coding downstream 89773 7126271 ~ 7151771 (+)
cdcp2 cdcp2 coding downstream 121436 7157934 ~ 7161192 (+)
cdc7 cdc7,LOC107579524 coding downstream 128207 7164705 ~ 7170115 (+)
G9930 NA non-coding upstream 25462 7009360 ~ 7010594 (+)
G9928 NA non-coding upstream 34577 7001060 ~ 7001479 (+)
G9918 NA non-coding upstream 109879 6925969 ~ 6926177 (+)
G9901 NA non-coding upstream 193631 6842151 ~ 6842425 (+)
G9893 NA non-coding upstream 206960 6828447 ~ 6829096 (+)
LOC122325829 NA non-coding downstream 6333 7042831 ~ 7043088 (+)
G9940 NA non-coding downstream 14227 7050725 ~ 7050994 (+)
G10012 NA non-coding downstream 153157 7189655 ~ 7196400 (+)
G10013 NA non-coding downstream 160592 7197090 ~ 7199537 (+)
G10020 fam69a,fam69aa,LOC107716951,LOC107568082,LOC107694372,LOC108436064 non-coding downstream 170009 7206507 ~ 7209934 (+)
G9925 LOC107563058,LOC107549254 other upstream 48937 6986298 ~ 6987119 (+)
G9889 NA other upstream 343681 6691668 ~ 6692375 (+)
G9887 NA other upstream 345277 6690372 ~ 6690779 (+)
sst2 LOC107549725,LOC107710806 other upstream 668102 6367177 ~ 6367954 (+)
trnag-gcc_21 NA other upstream 813537 6222445 ~ 6222519 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other downstream 61805 7098303 ~ 7105792 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other downstream 249172 7285670 ~ 7300101 (+)
G10108 NA other downstream 468124 7504622 ~ 7582385 (+)
G10212 NA other downstream 1070367 8106865 ~ 8107777 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other downstream 2126113 9162611 ~ 9171915 (+)

Expression


Co-expression Network