G10112


Basic Information

Item Value
gene id G10112
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7481630 ~ 7555541 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU15044
TCCCCTGACAAAAATAATTCTTGCAGCActattcattttgactttgGCTGTGTatgcagtttaaaatgaaacaaacgaCAAATGTTCAAGGGGGGTAGGAGACatagcttttaatttaaaaataaagtgtttagcCTTAAATTAACAATGGATCTCTATTCCAATTCAAAGGAGTGTAATGTCTACCGCACAAAACAACTGAAGACAAACATCTGTAATGCTATACAGCTAAAGGAAATCTccacaaaacaatttttttttaaataatgtaggTTATTTAAATGAGGCATTTCTTTGGCACTCTCTAAATGGAGTGCTTCAAAATGTTGCCTTCCCTGCCTTAAGTACTATGAAACTCACAACtgaagaggggggaaaaaatgtggATAAGTGCACCAGTTCGACCATGACAAGTCACTCTTACCTGTGTTGGCATAGTAATGCAACTAAGAGTAGAAAAAGTAGAGAAAAATCTGGCTttaacacatataaatacatcttTTTACAAACAAAGTTAACCCGGAACTAATATGCAATAAAGAAACTGGCATTCCTTTCacgtcaacaaaaaaaataatttaaataaaacaaaatccaaagCTGCTGTATCCACCTAAATGTAAGAGTATAAAGCTAGTTCTTCTATAATGTCCCATGTTTACAGTAGATCACACATGAGAGCTGCTCGTACTAATAAAGACTAGGTTCATCCATGAGATTCAAATATTGCCAAGCACTttaagaccaataaaaaaagGTCAGCGGGATAACGCATCCACGCTGACTAAAGATTTGTCTGACGGGATAAAGGTCTGTTCATGGGCGATCAGCCGGTGGGTCTGCAGGGAggtgattaaaaataacagttgaAACATTACCGTCACCTGATTGAAGACAGTAGGAGTCCGAGAGCAGTTCAACGCCCCCGCTGAGCCTGAGCCGGTGTGTGCTGTccgaacaaacaaacactcttACACAAGACATTCCTAGTATTCAATCTCTGAGACTCTTATCTGTGCCGGCTGAAGGCCATTCACAGTAAAATAACTTcaatgagaattcacacttagCCTGAAGGTCTAAATTTTATCTTGggtataaaaaaaacctgaaaaaaacccCCAGAAAAGGCTCTGTACTGTATTTGCGGTTGTCTGATCAAGTGATGACGTTTGTCCACTTTAAACATAGAGACCATCTAGTCCAGGcagtttttctgtttatgtTGTTGTCAGAGCTGGCGAATTGATCTGTTTGTTGAAGACCAAGTCTGTGTGGAGTAAGTTACTCCATGATGGCTCTGTATATGACGGGTTCGATGTAGTCCTCTCTATAGCGGGAGTTGATCACACGCTGCCTTTTCGAGTCTTCCTTCACCTCCTTCTCCACAAACACTCCTTTGAAGCGCATATCCGACG

Function

GO:

id name namespace
GO:0044451 obsolete nucleoplasm part cellular_component
GO:0005654 nucleoplasm cellular_component

KEGG:

id description
ko03022 Basal transcription factors

RNA

RNA id representative length rna type GC content exon number start site end site
TU15044 True 1418 lncRNA 0.39 2 7481630 7555541

Neighbor

gene id symbol gene type direction distance location
ptger4c ptger4c,LOC107716941,LOC107700513,LOC107743379,LOC107684935,LOC107564388,LOC107551710 coding upstream 90595 7388418 ~ 7391035 (+)
dmbx1a dmbx1a,LOC107588924,LOC107743378,LOC107700538,LOC107551711,LOC107684938,LOC108442545 coding upstream 134975 7340271 ~ 7346655 (+)
wls wls,LOC107684934 coding upstream 197820 7269715 ~ 7283810 (+)
scinlb LOC107588891,LOC107700536,LOC107658127,LOC107568091,LOC107743367,LOC108280481,LOC106568976 coding upstream 213225 7257164 ~ 7268405 (+)
ccdc18 ccdc18,LOC107716953,LOC107658134,LOC107568077 coding upstream 227059 7236939 ~ 7254571 (+)
glula LOC107563291,LOC107710552,LOC107700548,LOC107732203,LOC107553252 coding downstream 759590 8315131 ~ 8318467 (+)
elovl1a elovl1a,LOC107553254,LOC107732201,LOC107700551,LOC107710545,LOC108438881,LOC103047025 coding downstream 817697 8373238 ~ 8382443 (+)
cc2d1b LOC107563292,LOC107710553,LOC107700553,LOC107677533 coding downstream 831336 8386877 ~ 8403214 (+)
clcn2a clcn2,clcn2a,LOC107732945,LOC107710554,LOC107677884 coding downstream 884338 8439879 ~ 8486904 (+)
atp1b3a atp1b3a,LOC107700561,LOC107563307,LOC107710617,LOC107732952,LOC107677716,LOC107553263 coding downstream 1034700 8590241 ~ 8599595 (+)
G10094 NA non-coding upstream 59752 7420442 ~ 7421878 (+)
G10021 NA non-coding upstream 270692 7210738 ~ 7210938 (+)
G10020 fam69a,fam69aa,LOC107716951,LOC107568082,LOC107694372,LOC108436064 non-coding upstream 271696 7206507 ~ 7209934 (+)
G10013 NA non-coding upstream 282093 7197090 ~ 7199537 (+)
G10012 NA non-coding upstream 285230 7189655 ~ 7196400 (+)
G10127 LOC107551707,LOC107564386,LOC107743377,LOC107684933,LOC107710549 non-coding downstream 11769 7567310 ~ 7670458 (+)
G10145 LOC107564386,LOC107743377,LOC107684933,LOC107700544 non-coding downstream 55727 7611268 ~ 7612187 (+)
G10179 NA non-coding downstream 229937 7785478 ~ 7785832 (+)
G10183 NA non-coding downstream 318942 7874483 ~ 7882477 (+)
G10188 NA non-coding downstream 400252 7955793 ~ 7956206 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other upstream 181529 7285670 ~ 7300101 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other upstream 375838 7098303 ~ 7105792 (+)
G9925 LOC107563058,LOC107549254 other upstream 494511 6986298 ~ 6987119 (+)
G9889 NA other upstream 789255 6691668 ~ 6692375 (+)
G9887 NA other upstream 790851 6690372 ~ 6690779 (+)
G10212 NA other downstream 551324 8106865 ~ 8107777 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other downstream 1607070 9162611 ~ 9171915 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other downstream 2191029 9746570 ~ 9751212 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other downstream 2356087 9911628 ~ 9916861 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 2602991 10158532 ~ 10161809 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location