G10127 (LOC107551707,LOC107564386,LOC107743377,LOC107684933,LOC107710549)


Basic Information

Item Value
gene id G10127
gene name LOC107551707,LOC107564386,LOC107743377,LOC107684933,LOC107710549
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7567310 ~ 7670458 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU15064
AGGTGATGTAGACATGGTCCTGCTCTGGATACTAGGACTCATGGGACCCCCTCCCTTGCTGGTGAAGGCTTGCACACGGATATCATAGGTGGTGTCTGGTCGAAGCCCTTGGATGGTCATCTGAGTGTCGGAGGTGCGATTGGTGCCGTTCTGTATGTTGTTGATGTCGCGGTACATCACTAGGTATTGCGTGATTCGGCCGTTGCACTCAGACAGGGCCGGGGGGTCCCAGGCAAGGCGGGTGGTGGAGGTGGTCAGGCCCACGACGCGTAGGTTAAGGGGAAACCCACTTGGCACGTCCTCCGGGGTGCTGATCTCTTTTATATACTCCTCTCCGGCTCCAGCGCGGTTCCTGGCGCTCAGGTGGAAGGTGTAGGTGGCGCCCTTGTGTAGTTCTGTGGCGGTGTGGTGGTCGTCAGTGCGTGCGAACTCACGCACTTCGTAGTTCTCCTCCTCCACGCGCTTGTACCGCAGTCGGTAGCCAATCAGCTCACCCACCATGTCCTTAGGAGGCTGCCATTGGATGAGGGCTGTGTTGCCAATCGTGGTGCTGATGATCATGGTGGGTTTCCCAGGCAACCTGCTCCGGTGGTGGTGACGACTTTGGCTTTGCTGCGTGCCCCATCACCCTTGGTTGTGTACGCTGCCACAGTAACGGAGTAAGAGGTCTCGGAGAGAAGTCCAGTGATTACAGCCTCCTGTTAAACAGAACCAGCATGATCGCTGAGATGTCAAGACAGCCTTATCTACCCTCATGCCATCCCCACTGGCAGACACTGATCATAACCCCTCCAATAAACCACACGCACCCCCAACACACCCTTACTATTTCCAAACTcccttttaaaactttttttttttcatttcatgttggACATTCAAACAAGAACTCTGAAAGACTTCGAAAA
>TU15065
aggcaaggcaaGTGGTGTCTGGTCGAAGCCCTTGGATGGTCATCTGAGTGTCGGAGGTGCGATTGGTGCCGTTCTGTATGTTGTTGATGTCGCGGTACATCACTAGGTATTGCGTGATTCGGCCGTTGCACTCAGACAGGGCCGGGGGGTCCCAGGCAAGGCGGGTGGTGGAGGTGGTCAGGCCCACGACGCGTAGGTTAAGGGGAAACCCACTTGGCACGTCCTCCGGGGTGCTGATCTCTTTTATATACTCCTCTCCGGCTCCAGCGCGGTTCCTGGCGCTCAGGTGGAAGGTGTAGGTGGCGCCCTTGTGTAGTTCTGTGGCGGTGTGGTGGTCGTCAGTGCGTGCGAACTCACGCACTTCGTAGTTCTCCTCCTCCACGCGCTTGTACCGCAGTCGGTAGCCAATCAGCTCACCCACCATGTCCTTAGGAGGCTGCCATTGGATGAGGGCTGTGTTGCCAATCagttcaccca

Function

NR:

description
PREDICTED: receptor-type tyrosine-protein phosphatase F-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15064 True 908 lncRNA 0.37 2 7613349 7615136
TU15065 False 477 lncRNA 0.59 3 7567310 7670458

Neighbor

gene id symbol gene type direction distance location
ptger4c ptger4c,LOC107716941,LOC107700513,LOC107743379,LOC107684935,LOC107564388,LOC107551710 coding upstream 176275 7388418 ~ 7391035 (+)
dmbx1a dmbx1a,LOC107588924,LOC107743378,LOC107700538,LOC107551711,LOC107684938,LOC108442545 coding upstream 220655 7340271 ~ 7346655 (+)
wls wls,LOC107684934 coding upstream 283500 7269715 ~ 7283810 (+)
scinlb LOC107588891,LOC107700536,LOC107658127,LOC107568091,LOC107743367,LOC108280481,LOC106568976 coding upstream 298905 7257164 ~ 7268405 (+)
ccdc18 ccdc18,LOC107716953,LOC107658134,LOC107568077 coding upstream 312739 7236939 ~ 7254571 (+)
glula LOC107563291,LOC107710552,LOC107700548,LOC107732203,LOC107553252 coding downstream 644673 8315131 ~ 8318467 (+)
elovl1a elovl1a,LOC107553254,LOC107732201,LOC107700551,LOC107710545,LOC108438881,LOC103047025 coding downstream 702780 8373238 ~ 8382443 (+)
cc2d1b LOC107563292,LOC107710553,LOC107700553,LOC107677533 coding downstream 716419 8386877 ~ 8403214 (+)
clcn2a clcn2,clcn2a,LOC107732945,LOC107710554,LOC107677884 coding downstream 769421 8439879 ~ 8486904 (+)
atp1b3a atp1b3a,LOC107700561,LOC107563307,LOC107710617,LOC107732952,LOC107677716,LOC107553263 coding downstream 919783 8590241 ~ 8599595 (+)
G10112 NA non-coding upstream 11769 7481630 ~ 7555541 (+)
G10094 NA non-coding upstream 145432 7420442 ~ 7421878 (+)
G10021 NA non-coding upstream 356372 7210738 ~ 7210938 (+)
G10020 fam69a,fam69aa,LOC107716951,LOC107568082,LOC107694372,LOC108436064 non-coding upstream 357376 7206507 ~ 7209934 (+)
G10013 NA non-coding upstream 367773 7197090 ~ 7199537 (+)
G10179 NA non-coding downstream 115020 7785478 ~ 7785832 (+)
G10183 NA non-coding downstream 204025 7874483 ~ 7882477 (+)
G10188 NA non-coding downstream 285335 7955793 ~ 7956206 (+)
LOC122326720 NA non-coding downstream 357292 8027750 ~ 8031107 (+)
G10198 NA non-coding downstream 411359 8081817 ~ 8090536 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other upstream 267209 7285670 ~ 7300101 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other upstream 461518 7098303 ~ 7105792 (+)
G9925 LOC107563058,LOC107549254 other upstream 580191 6986298 ~ 6987119 (+)
G9889 NA other upstream 874935 6691668 ~ 6692375 (+)
G9887 NA other upstream 876531 6690372 ~ 6690779 (+)
G10212 NA other downstream 436407 8106865 ~ 8107777 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other downstream 1492153 9162611 ~ 9171915 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other downstream 2076112 9746570 ~ 9751212 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other downstream 2241170 9911628 ~ 9916861 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 2488074 10158532 ~ 10161809 (+)

Expression


Co-expression Network