G10183


Basic Information

Item Value
gene id G10183
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7874483 ~ 7882477 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU15160
ggcaggcaggcagggaGGGAGACAGCGTGATTGAGGGGACTGTAGGCAGGCAGACCAGCAGAGAGTCTCCGAGCGCTCTGGAGCACAAGTCCGTGAGACACAAACTCTGGATTCTCAACAATAGAAGCTTTTCCACTCTGCCATAGTTACAGAAAGCAGTCTCAATAACGGGATTATAACGGCCGCGTGGCACATTAGTAAAGGAAGAGACGTTACTCTGTGGAATCAAAGAATTTTTCCAGTCGATTTTTAAAAGTGGATTTGTACGTGGCCAACTGCACCGGGCGAAACGAGCGGTTGCCGTGCACGGAAAGAAATGCAAACCGCGGCGGAACGGAGAGACGTCTCCAGACTGTATCATGAGGACAAGAGGAAGCAGCGTGCAGGAGAACGGGAAGATGCAGTTCTGGCGCTTCATCTTCCCACTGGTGTGCCAGATGGAGAAGACCGAGGGAGTCCTGGCATAGAGGGGGTGCTGGTGACTGCCCAACCATCACAGAAGGGCTCCCCCCTCTTTCCAACTGTGTCTGTCCTCTGGACAAAGACAAGAAGAGACCATTTAAACAGAAAGTAACCG

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15160 True 577 lncRNA 0.53 2 7874483 7882477

Neighbor

gene id symbol gene type direction distance location
ptger4c ptger4c,LOC107716941,LOC107700513,LOC107743379,LOC107684935,LOC107564388,LOC107551710 coding upstream 483448 7388418 ~ 7391035 (+)
dmbx1a dmbx1a,LOC107588924,LOC107743378,LOC107700538,LOC107551711,LOC107684938,LOC108442545 coding upstream 527828 7340271 ~ 7346655 (+)
wls wls,LOC107684934 coding upstream 590673 7269715 ~ 7283810 (+)
scinlb LOC107588891,LOC107700536,LOC107658127,LOC107568091,LOC107743367,LOC108280481,LOC106568976 coding upstream 606078 7257164 ~ 7268405 (+)
ccdc18 ccdc18,LOC107716953,LOC107658134,LOC107568077 coding upstream 619912 7236939 ~ 7254571 (+)
glula LOC107563291,LOC107710552,LOC107700548,LOC107732203,LOC107553252 coding downstream 432654 8315131 ~ 8318467 (+)
elovl1a elovl1a,LOC107553254,LOC107732201,LOC107700551,LOC107710545,LOC108438881,LOC103047025 coding downstream 490761 8373238 ~ 8382443 (+)
cc2d1b LOC107563292,LOC107710553,LOC107700553,LOC107677533 coding downstream 504400 8386877 ~ 8403214 (+)
clcn2a clcn2,clcn2a,LOC107732945,LOC107710554,LOC107677884 coding downstream 557402 8439879 ~ 8486904 (+)
atp1b3a atp1b3a,LOC107700561,LOC107563307,LOC107710617,LOC107732952,LOC107677716,LOC107553263 coding downstream 707764 8590241 ~ 8599595 (+)
G10179 NA non-coding upstream 88651 7785478 ~ 7785832 (+)
G10127 LOC107551707,LOC107564386,LOC107743377,LOC107684933,LOC107710549 non-coding upstream 204025 7567310 ~ 7670458 (+)
G10145 LOC107564386,LOC107743377,LOC107684933,LOC107700544 non-coding upstream 262296 7611268 ~ 7612187 (+)
G10112 NA non-coding upstream 318942 7481630 ~ 7555541 (+)
G10094 NA non-coding upstream 452605 7420442 ~ 7421878 (+)
G10188 NA non-coding downstream 73316 7955793 ~ 7956206 (+)
LOC122326720 NA non-coding downstream 145273 8027750 ~ 8031107 (+)
G10198 NA non-coding downstream 199340 8081817 ~ 8090536 (+)
G10200 NA non-coding downstream 201059 8083536 ~ 8089471 (+)
G10219 pbx1a,pbx1b,LOC107677498,LOC108272157,LOC107564502 non-coding downstream 336788 8219265 ~ 8262830 (+)
G10108 NA other upstream 292098 7504622 ~ 7582385 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other upstream 574382 7285670 ~ 7300101 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other upstream 768691 7098303 ~ 7105792 (+)
G9925 LOC107563058,LOC107549254 other upstream 887364 6986298 ~ 6987119 (+)
G9889 NA other upstream 1182108 6691668 ~ 6692375 (+)
G10212 NA other downstream 224388 8106865 ~ 8107777 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other downstream 1280134 9162611 ~ 9171915 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other downstream 1864093 9746570 ~ 9751212 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other downstream 2029151 9911628 ~ 9916861 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 2276055 10158532 ~ 10161809 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G26889 NA non-coding CI01000004 null 3884365 ~ 3907456 (-)