si:ch211-267e7.3 (si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699)


Basic Information

Item Value
gene id si:ch211-267e7.3
gene name si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9606323 ~ 9618473 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU15790
GGTTGTGCTGTACTCAAGCTCAACTCTTCACTGGGCAACAGCCTGACACTGGAGATTTACCCGGGCAACCTGGACATGCACGGTCCAGACGGAGAGTCTGTGTTTGATGCCAGGACTAATGACTCAACAAGCCACCGGTCCAACCTTCTCCAGCTCCACCAGGTGGAGCCAGTGCAGACCCCCCACAGCGAGAGTAATGAGTTTGAGGTGGAATCTCTAGATCGTGACATCAGCATGTCTGACATGTACAGATGGAAGGTTTCTGCGTACGCGCCCTGCAGCTCAACA
>XM_043262413.1
ATGCAAGCGTGCAGCAGTGAAGCACTGTGTCTCTGTCTTTGCCAGGACAGCAGTGAGGGGAGGGAGGATTTCCAGAGGCAGCCAGATGAGGTAGCGCAGTGGTGGGGTGAATGGAGCAGCTGGTCCACCTGTTCCCGTACCTGCGGAGGAGGTGTGCGCTCTCAAGAGCGTCACTGTCTGCAGCAGAGACTGACGTCGACCCAAAACATCAACAGTTCCTTCTGCACTGGACCGTCCAAACAGTATCAACTTTGTACAAATCAGCCGTGCCCAAACAGCAGAATCAGCTTCAAACAGCACCAGTGCTCTCAATTCAATGCCAAAGCCTTCGGCAGGAAGCACTATGAGTGGGTTCCACTTTATCCGGATGATTACATCAACATCTCCAATAAGCCATGTGACCTCCAGTGCACCACAACCACAGGAGAAAGGCAGCTGTTGGTGCCTGCCCATGATGGGACATTCTGCAGGGATGGGATCTACCAAGGTGTTTGCATCGAGGGCCAGTGTCAGGTGGTAGGGTGTGATGGGAAATTGTATTCCAGTAAAACCATAGACAAATGTGGAGTCTGTGGTGGAAATGGAGGTTCTTGTTATCGTGTCTCAGGATCTTACCGGAAAGGGATCACACAGTTAGGTTATGTGTTCATAACCAATATACCAGTTGGTGCTACTGATATCCAAATCATAGAGCGACggaaaactgaaaatatcttGGCTCTGTCTGACGAAGCTGGTCACTTCTTCTTCAATGGGAATAGTGTGATTGACAACCCACAGAACTTCCATGTTGCTGGGACAGTCTTTAAGTATAGGAGGCCAGCTAACCTCTTCTCTGATGGCTTTGAGTACATCATGGCTCAGGGTCCCACCCATCAGGCCCTGAATGTCATGtATTACAACCTCAATGGAAAGATGCCTCACATCACATATGAGTACACAGTTCCTCGAGCTCCTGAGCTGAGGGCAGCACCTCCAGTGGTCTCTACACCCGAGCAACCTCAAATAAGCAACCTCATGTCAAAGACATCCAAAGACCCTTCACCAGCAGAGCAGAAAATGAACACGTCCTCTACTGAGCTCTTGTCCATTCATAATGAAATCGAAGCTCGTAAAGAGTATGGAAAGAAAGGCAACCAGAGCACTTCACTGGGACCTCAAGATAATGTGGAGGTGCACGTGGGTCATGAAGAGCTGTTGTGGGAACTTCAGGCTTCTGTAAACTTCAGTGAGCTGCCTGGTCTGGTGTTGTTTAGACCTGCCAGCGAGGTTCTCCAGAATGAGCTAGATGATAAAATGCACCATCTTGAAGCACAAGGTAGTTTTGGCCCTGATTCCAACCTGATTGATGGTGATTCGTCTAGTTCCAGTGACTCCAACCTTACATCTACACCGGTACTGAAAAGTCTCTTCTACGATGGAGCGCCTTGGCCCTCGGGCTCCAGACAGCCTTGTAAAGACCCCTCTGCACTCACTGGTTGTGCTGTACTCAAGCTCAACTCTTCACTGGGCAACAGCCTGACACTGGAGATTTACCCGGGCAACCTGGACATGCACGGTCCAGACGGAGAGTCTGTGTTTGATGCCAGGACTAATGACTCAACAAGCCACCGGTCCAACCTTCTCCAGCTCCACCAGGTGGAGCCAGTGCAGACCCCCCACAGCGAGAGTAATGAGTTTGAGGTGGAATCTCTAGATCGTGACATCAGCATGTCTGACATGTACAGATGGAAGGTTTCTGCGTACGCGCCCTGCAGCTCAACATGTACAACAGGCATAAGCACATCCTATGCCTTGTGTGTGAAGTATGACGGGTCAGAGGTGGACGAGAGCTACTGCGACGCTTTGACCAGGCCGGAGCCCACACATGAGTTCTGTACAGGCAAAGAGTGCCTGCCCAGGTGGGAAACTAGTCGCTGGAGCGAGTGTTCTCGGACATGTGGAGAAGGCTTTCAGTTTCGCACGGTCCGCTGCTGGAAGATGATGGCCCCTGGATTTGACAGCTCTGTTTACGATGAGCTGTGTCAGGCTGCGGAACTGCAGAAGCCCATCACACGGAAAGCCTGCAAGAGCAAAAGCTGCGGCCCACAGTGGGAGATCTCAGACTGGTCTGAGTGTTCAGCGCGGTGTGGCGGTCGAGGGGTGAGGAGCCGCGAGGTCCGCTGCTCCATGGAGGCCAGACTCTGCAACGAGTCCACCAGACCGGTCAGCCAGAGAGAGTGCGAGGGGCCGCCCTGTGATCGCAGGTGGACTGTCTCTGATTGGGGGCCGTGCTCAGGGCCGTGTGGGGAGGGCAGGATGAGACGCTATGTGGTGTGTAAGAACAGCAGTGGGAAGGTGATTTCTGATGGCCAGTGTGATCCAGAGCTCAAGCCGCTGGCCGTGCATCCATGTGGAGACAAAAACTGCCCCGCCCACTGGGTGGAGCAAGAGTGGGAACAGTGTAATGCCACATGTGGCCGTGGGGTGAAGACGCGTCAGCTGGTGTGTGCTGGGCTGGAGGGTGGCGTCTTCAAGGAGTTTCCTGAAAGGATGTGTGACAGATCCCTTAGACCGGCGGACAGTGCGGCCTGTTTTGAGAGACCCTGCTCCAAGTGGTTCACTACATCCTGGTCCCAGTGCAGCAAGACGTGTGGGATCGGAGTGCGTGTGCGAGAGGTGAAGTGTTATCAAGGAGAAGAACTGGGCCACAGCTGCGATTCAGCGCTGAGACCAGAGGCCAGGCAGAGCTGTGAGGTGCAGCCCTGCACTACTGAGCCGCCAGCTGAGGACGCCTGTCAGGATAAAGCCACGGCTAACTGCGCTCTCGTCCTGCGGGTGAAGCTGTGCACTCACTGGTACTACAGGAAGGCCTGCTGTCTGTCCTGCAAGAACAAGAGCCAGTGAAGTCCGCCTGGCTCCTCACTGTGAAGACCCTCCTCCACATACTGGAAGCACTGAACCCAGAACTGACCATATCCAGCTGTTAACCTCTcctccgtaaaaaaaaaaaaaggtgctatATGAAAAGGGCCCAGGCCCTGGTCGTGGTCCTGCAGGGACCCGGTAAAGGCAGCTCCTGTAACTGGACTG

Function

symbol description
si:ch211-267e7.3 Predicted to enable metalloendopeptidase activity. Predicted to be involved in extracellular matrix organization. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix.

NR:

description
PREDICTED: ADAMTS-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15790 False 288 lncRNA 0.35 2 9611895 9612883
XM_043262413.1 True 3072 mRNA 0.53 17 9606323 9618473

Neighbor

gene id symbol gene type direction distance location
frrs1a LOC107693701,LOC107722512,LOC107594678 coding downstream 28574 9570591 ~ 9577749 (-)
dpydb dpyd,dpydb,LOC107677757,LOC107718148 coding downstream 159541 9346029 ~ 9446782 (-)
cnn3b cnn3b,cnn3,LOC107680046,LOC107730489,LOC107570492 coding downstream 335226 9263194 ~ 9271097 (-)
f3b f3,LOC107730491,LOC107564531,LOC107680051 coding downstream 355354 9248600 ~ 9250969 (-)
arhgap29b arhgap29,LOC107745695,LOC107564532,LOC107680050 coding downstream 367374 9212459 ~ 9238949 (-)
dusp12 dusp12,LOC107722526,LOC107589915,LOC107677752,LOC107718184,LOC107693747 coding upstream 30335 9648808 ~ 9651247 (-)
tpra tpra,LOC107693743,LOC107722541,LOC107718142,LOC107589873,LOC107677758 coding upstream 63500 9681973 ~ 9702207 (-)
pdca pdca,LOC107594646,LOC107722648,LOC107693745,LOC107589870,LOC107677764 coding upstream 92320 9710793 ~ 9713560 (-)
ptgs2a ptgs2a,LOC107594645,LOC107722606,LOC107693741,LOC107677761,LOC107718138,LOC107589869 coding upstream 108174 9726647 ~ 9729940 (-)
rnf2 rnf2,LOC107718134,LOC107564705,LOC107693737,LOC107677769 coding upstream 157594 9776067 ~ 9780623 (-)
G10621 NA non-coding downstream 128 9605638 ~ 9606195 (-)
G10562 NA non-coding downstream 145239 9457163 ~ 9461084 (-)
G10569 NA non-coding downstream 155397 9450560 ~ 9450926 (-)
G10518 ptbp2,ptbp2b,LOC107570490,LOC107594658 non-coding downstream 275080 9327802 ~ 9331243 (-)
G10438 NA non-coding downstream 662730 8943099 ~ 8943593 (-)
G10708 NA non-coding upstream 129914 9748387 ~ 9748740 (-)
G10773 NA non-coding upstream 307632 9926105 ~ 9927837 (-)
G10812 NA non-coding upstream 428345 10046818 ~ 10047373 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding upstream 540105 10158578 ~ 10160064 (-)
G10987 NA non-coding upstream 607745 10226218 ~ 10226856 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other downstream 86542 9491563 ~ 9519781 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other downstream 396282 9182056 ~ 9210041 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 1178419 8403327 ~ 8427904 (-)
G10213 NA other downstream 1498535 8106856 ~ 8107788 (-)
G10196 NA other downstream 1534489 8070776 ~ 8071834 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 461709 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 501500 10119973 ~ 10139585 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other upstream 522462 10140935 ~ 10143709 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other upstream 695560 10314033 ~ 10320403 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other upstream 757590 10376063 ~ 10378211 (-)

Expression


Co-expression Network