G10708


Basic Information

Item Value
gene id G10708
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9748387 ~ 9748740 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU15912
agagacagacagagagacagacaaagagacagacatgGAAAACCAAACCAGTTGAGAAGCACTgctttaaagaaatgcatttaccTTTTCATGCCACTGCAGTAGGATGGCACTGCTGTTGTCTGAGGGTCTTTCAAAGCCTCTGTAGATGTATTTCATCAGGAGATCGACTCCAGTTTTATCTAGAGACTGAACAGCCTTTTCTATATCGCTAGTCTTGAAAGAGCTGAGCACTTTCAACACAAGGCTTTCAGCCCGttcctgcaaacacacacacacacataataaactACTCCTGAAAACAGATCACGAATCCAT

Function

GO:

id name namespace
GO:0005787 signal peptidase complex cellular_component

KEGG:

id description
ko00030 Pentose phosphate pathway
ko03060 Protein export

RNA

RNA id representative length rna type GC content exon number start site end site
TU15912 True 318 lncRNA 0.43 2 9748387 9748740

Neighbor

gene id symbol gene type direction distance location
ptgs2a ptgs2a,LOC107594645,LOC107722606,LOC107693741,LOC107677761,LOC107718138,LOC107589869 coding downstream 18447 9726647 ~ 9729940 (-)
pdca pdca,LOC107594646,LOC107722648,LOC107693745,LOC107589870,LOC107677764 coding downstream 34827 9710793 ~ 9713560 (-)
tpra tpra,LOC107693743,LOC107722541,LOC107718142,LOC107589873,LOC107677758 coding downstream 46180 9681973 ~ 9702207 (-)
dusp12 dusp12,LOC107722526,LOC107589915,LOC107677752,LOC107718184,LOC107693747 coding downstream 97140 9648808 ~ 9651247 (-)
frrs1a LOC107693701,LOC107722512,LOC107594678 coding downstream 170638 9570591 ~ 9577749 (-)
rnf2 rnf2,LOC107718134,LOC107564705,LOC107693737,LOC107677769 coding upstream 27327 9776067 ~ 9780623 (-)
kifap3b kifap3b,LOC107564707,LOC107693735,LOC107718166,LOC108444490 coding upstream 56289 9805029 ~ 9830206 (-)
mfsd12a mfsd12a,LOC107693733,LOC107722641,LOC107564710,LOC107691677,LOC107718130,LOC107589862 coding upstream 123473 9872213 ~ 9879088 (-)
csnk1g2a csnk1g2,csnk1g2a,LOC107722536,LOC107718129,LOC107589861,LOC107691647,LOC107693732,LOC106925954 coding upstream 131701 9880441 ~ 9896499 (-)
mknk2a mknk2a,LOC107693729,LOC107722535,LOC107564711,LOC107718128,LOC107589858,LOC107691640,LOC108432510 coding upstream 151177 9899917 ~ 9910873 (-)
G10621 NA non-coding downstream 142192 9605638 ~ 9606195 (-)
G10562 NA non-coding downstream 287303 9457163 ~ 9461084 (-)
G10569 NA non-coding downstream 297461 9450560 ~ 9450926 (-)
G10518 ptbp2,ptbp2b,LOC107570490,LOC107594658 non-coding downstream 417144 9327802 ~ 9331243 (-)
G10438 NA non-coding downstream 804794 8943099 ~ 8943593 (-)
G10773 NA non-coding upstream 177365 9926105 ~ 9927837 (-)
G10812 NA non-coding upstream 298078 10046818 ~ 10047373 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding upstream 409838 10158578 ~ 10160064 (-)
G10987 NA non-coding upstream 477478 10226218 ~ 10226856 (-)
G11057 NA non-coding upstream 917737 10666477 ~ 10666712 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other downstream 129914 9606323 ~ 9618473 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other downstream 228606 9491563 ~ 9519781 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other downstream 538346 9182056 ~ 9210041 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 1320483 8403327 ~ 8427904 (-)
G10213 NA other downstream 1640599 8106856 ~ 8107788 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 331442 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 371233 10119973 ~ 10139585 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other upstream 392195 10140935 ~ 10143709 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other upstream 565293 10314033 ~ 10320403 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other upstream 627323 10376063 ~ 10378211 (-)

Expression


Co-expression Network