G10773


Basic Information

Item Value
gene id G10773
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9926105 ~ 9927837 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU16008
TTAATGTTAATATGCTACGTTTTACGGTAGCGAAGAAAACACAGCGAAAAGACCTACAAGACATTTCCACCATGCACTTCAAGTTATATGGTTTTGGATTTATTATGAGCATCTATTGTATTTGCGATAGTCCTGAGGATAGCTGATAAATGTATAGGGTAGTGAATGTCGTATGCATATTCTCCTGCCAGTTATGTCAATCAtgcacaaacacagatcactgcAACTGTCCCATGATGTAACATACATCTGCCACAAATGTTTCACTGAAAACATTGTTTACTTTATAATCATACATTATTGAGAATCAAAAAGGGTAACTGGCAATCGACAATGAAGAATAACATGTCAAGCAggtatgctttttaaaaagcaatgtcATCAGACAATACGTATCtgacacaaatacattttcacttgTATAATAATACTTCAGGTGAACAGAAGACTCTTTCGATCTGTGTGCATATTCTCTCAAGTGATTGAATAATCAATTATATGACTTCaatagatgcatttaaaaacattgacaaaaatctgtacatttttgcaagtcaatattatgtaaaaaaaaaaaaaaaaaaaaaagagaaaataatcataaatatagTTATCAGATAATTACAAAGCACTGAAGTGACCAGAAAAAGTGCACAGTTACTTAAATAAACTACGAAAGGAACTTCAAATGCGTAACAAATTGACTTTGTGTCGCTGACCATCAAGAAAACATAGAATAATGCGCAAGACCTTCTCAGATCACACATGCAGAACGGTTCTCCCATAACGTGTTCTCTCCGGACAGGTATTAAACCATGTTTAAAAGGGCTTTGAATGTCAATTTCAGGCATTTTAACGTTGACAGATCATTTTTGGTCATCCAAAGACCGATGAGAGACTCAcaaacaattataattaaaaacatgagaTTTTAAAAAGGCACTACAAAGGCAGATAGTTTTTCCCCTTCAGCTGATCCGAGGGAGCGTCTATCACCAAAGCTTGAGAGTATGTACTTTATCCAACACGTTGGGGCTACAAAGCTATGCAGACACATACAGTATGCTGATAAGGTTTGATCTAGTTGGGCTCTTTCCACGCCACCAGGCTGTGCTGAGTGGGTGACGTACGTTGAGCAGAAGAGTGACGGGGGAGAGAAGGGACACAGTCTTTCAGTCATCGCCCCTGCATAAAGGCCCGAGCCGAGGATCCTTTCCACCAGTGTTATAGCTTTGGTGCAAAACCAGTCTTTAAATGTACCTACTTGTGATACGGTAGCTCATCCACGGTGCCTATGCGAGATCTTGTCCGTTTTGGACAGTATTGTGCCAACAGTTTGATTCTTAGTGCAATGCGCAGTGCTGTTATTAGATAAACCCTGAATTCCGCCCCTGGTcctttttgtttgcttatttctATTACAgtataaagtttttgttttttttgttgttttctcatttcgtttttgtttgttcctgTGCATTTATATGTTGCTTTCGATACCTTTCCCTCTGCCCCCTGTCAGTTTGGAGGCCTCTCTCATGCAAAAATCACGGCCGAGCAGCTTCCTTGTGTCATGTGGATGTGGCTTCCAGGTAGCTCTGGAGTTTACGTACAGTCGACTCATCCAAGGAGAACAGGTCAAAGTCAAAGGTTGTATTGGTGATGTTGAAATGGCCGGTCTTTTCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16008 True 1691 lncRNA 0.41 2 9926105 9927837

Neighbor

gene id symbol gene type direction distance location
mknk2a mknk2a,LOC107693729,LOC107722535,LOC107564711,LOC107718128,LOC107589858,LOC107691640,LOC108432510 coding downstream 15232 9899917 ~ 9910873 (-)
csnk1g2a csnk1g2,csnk1g2a,LOC107722536,LOC107718129,LOC107589861,LOC107691647,LOC107693732,LOC106925954 coding downstream 29606 9880441 ~ 9896499 (-)
mfsd12a mfsd12a,LOC107693733,LOC107722641,LOC107564710,LOC107691677,LOC107718130,LOC107589862 coding downstream 47017 9872213 ~ 9879088 (-)
kifap3b kifap3b,LOC107564707,LOC107693735,LOC107718166,LOC108444490 coding downstream 95899 9805029 ~ 9830206 (-)
rnf2 rnf2,LOC107718134,LOC107564705,LOC107693737,LOC107677769 coding downstream 145482 9776067 ~ 9780623 (-)
amotl2b LOC107693726,LOC107722615,LOC107691578,LOC107718124,LOC107589855,LOC107564722 coding upstream 38599 9966436 ~ 9973817 (-)
aire LOC107589913,LOC107691773,LOC107718121,LOC107579220 coding upstream 54148 9981985 ~ 9987455 (-)
rab6bb rab6bb,rab6b,LOC107589854,LOC107693724,LOC107718122,LOC108432504 coding upstream 61292 9989129 ~ 9995620 (-)
espnlb espnlb,LOC107691737,LOC107722507,LOC107718163,LOC107580328,LOC107589891 coding upstream 69807 9997644 ~ 10007589 (-)
kif1ab kif1ab,LOC107722550,LOC107691514,LOC107693723,LOC108432503,LOC107589853 coding upstream 80509 10008346 ~ 10033298 (-)
G10708 NA non-coding downstream 177365 9748387 ~ 9748740 (-)
G10621 NA non-coding downstream 319910 9605638 ~ 9606195 (-)
G10562 NA non-coding downstream 465021 9457163 ~ 9461084 (-)
G10569 NA non-coding downstream 475179 9450560 ~ 9450926 (-)
G10518 ptbp2,ptbp2b,LOC107570490,LOC107594658 non-coding downstream 594862 9327802 ~ 9331243 (-)
G10812 NA non-coding upstream 118981 10046818 ~ 10047373 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding upstream 230741 10158578 ~ 10160064 (-)
G10987 NA non-coding upstream 298381 10226218 ~ 10226856 (-)
G11057 NA non-coding upstream 738640 10666477 ~ 10666712 (-)
G11064 rpp40,LOC107722637,LOC107688445,LOC107689405 non-coding upstream 739805 10667642 ~ 10668967 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other downstream 307632 9606323 ~ 9618473 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other downstream 406324 9491563 ~ 9519781 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other downstream 716064 9182056 ~ 9210041 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 1498201 8403327 ~ 8427904 (-)
G10213 NA other downstream 1818317 8106856 ~ 8107788 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 152345 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 192136 10119973 ~ 10139585 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other upstream 213098 10140935 ~ 10143709 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other upstream 386196 10314033 ~ 10320403 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other upstream 448226 10376063 ~ 10378211 (-)

Expression


Co-expression Network