G10819


Basic Information

Item Value
gene id G10819
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10058532 ~ 10063814 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU16060
ttttttttttttttttttttttttttttACACTTTCAatacaaaattttattacaagATGATAGACAATAATGGTTTAATAGAAAGTTCTCAAGTGAAACATTAAGACTGGAATGTTAACAGCGGCAGAGTTTTCGTGACCAAATATAGAAATCAAATTCAACTGTATAAAAGTTATATTTGCTTTTGCGTAACAGATAGAAACCTACATTTTCggatatttcatttaaaacttttattatttatgatgtgGAAATTTGACTTAGCAACAGGGATAAGATAAAATATTTGAACCGTAAGAAGAGGTAAAAACTTGGCATGCGTCAAGGTTAAAGATCACAACAGCATCTTTCAATGCGTCCGAATTTCACTCCACACTGCACTCATACCAGAACAACGTCTGATAGCAAATATACGACAGTATGCACtcaagtacataaaaaaaaaaaaatcagcaaaatgAGCTTTAACATTAGAGAACATCGTATTCTTCATTAGACGGCATAGGGAAGGAATCATGGGTCACAGTATAACGTTTTGCAACTGTTTGGGGACCATTCAACCGAACGGCACGCATTTCAAGACTTCATGCAGGGAAAAGAGAGAAGTGCTTCAGAAAACTCCTGTTTAGGAGGACGGCAATCTCTCTGGCAACATTTAGGAACAGTATAAAACGGTTTCTCCAAAAGACCGCCACCGTGACACTCGAATTCAACAGCTGGCTGTATGTTCACAGTGCTTCTTTAGCTTGATGGGAGAGAAATGAGCGGTCATGGAGCTACGCTACTATTAAAGGTGCGCTACAGTAAAAGATTCCTTTCCAGCAGCATTTGGCTTtcgtaacagaaaaaaaaaaaaagttttttgaggGGTGGGttgaataaaatggcaaaaacaaaattaatactgcttaaaaaaaaaaaaaaaaaaaaaacaccttaacCAAAAATATCAAATCGTACAAGAGTGAAAGAAACTAAGAAAATGGCAAGCAAGACGAGCTAAGGACCAGTCTCTTCTATTTTTCCACATTTAACTTCTCGTTTCGTGTCTGACTGGGTCAAGCTCGAACGACAGGTCAA

Function

GO:

id name namespace
GO:0042116 macrophage activation biological_process
GO:0002274 myeloid leukocyte activation biological_process
GO:0045321 leukocyte activation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16060 True 1081 lncRNA 0.36 2 10058532 10063814

Neighbor

gene id symbol gene type direction distance location
thap4 thap4,LOC107586721,LOC107693706,LOC107589912,LOC107691505 coding upstream 9426 10046848 ~ 10049106 (+)
agxtb agxtb,LOC107722583,LOC107718120,LOC107693722,LOC107691560,LOC107585700,LOC105899541,LOC103036651,LOC108432502 coding upstream 17679 10036539 ~ 10040853 (+)
myo7bb LOC107693708,LOC107722614,LOC107564725,LOC107589856,LOC107691586 coding upstream 97057 9942861 ~ 9961475 (+)
sap130b sap130,sap130b,LOC107693727,LOC107691745,LOC107589892,LOC107722618 coding upstream 117785 9928426 ~ 9940747 (+)
mllt1b LOC107722626,LOC107718125,LOC107564713,LOC107691596,LOC107589857 coding upstream 131288 9917331 ~ 9927244 (+)
LOC122324805 LOC107695158,LOC107722506,LOC107586159,LOC107691708 coding downstream 11343 10075157 ~ 10077334 (+)
cldn18 LOC107722530,LOC107693705,LOC107718157,LOC107586152,LOC107589887 coding downstream 14586 10078400 ~ 10079945 (+)
znf644a LOC107722621,LOC107693692,LOC107589847,LOC107586139 coding downstream 32595 10096409 ~ 10107424 (+)
gtf2b gtf2b,LOC107693714,LOC107585659,LOC107718116 coding downstream 50759 10114573 ~ 10119939 (+)
fam110b fam110b,LOC107585622,LOC107722620,LOC107693712,LOC107691438,LOC107589841,LOC107718111 coding downstream 104426 10168240 ~ 10198276 (+)
G10753 NA non-coding upstream 42710 10014559 ~ 10015822 (+)
G10752 NA non-coding upstream 44166 10011937 ~ 10014366 (+)
G10738 NA non-coding upstream 47786 9989143 ~ 10010746 (+)
G10749 NA non-coding upstream 65137 9992784 ~ 9993395 (+)
G10674 kifap3b,LOC107693735,LOC107564707,LOC107722509,LOC107718166 non-coding upstream 232312 9825615 ~ 9826220 (+)
G10838 NA non-coding downstream 77528 10141342 ~ 10141971 (+)
G10883 NA non-coding downstream 145749 10209563 ~ 10209851 (+)
G10902 NA non-coding downstream 327855 10391669 ~ 10391956 (+)
G10903 NA non-coding downstream 328879 10392693 ~ 10393150 (+)
G10901 NA non-coding downstream 358123 10421937 ~ 10539990 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other upstream 141671 9911628 ~ 9916861 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 307320 9746570 ~ 9751212 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 886617 9162611 ~ 9171915 (+)
G10212 NA other upstream 1950755 8106865 ~ 8107777 (+)
G10108 NA other upstream 2476147 7504622 ~ 7582385 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other downstream 94718 10158532 ~ 10161809 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 598915 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 647316 10711130 ~ 10718194 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 1056040 11119854 ~ 11135991 (+)
kcnh2a kcnh2a,LOC107718079,LOC107589806,LOC107722642,LOC107676096,LOC107586123 other downstream 1165946 11229760 ~ 11264234 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G28309 NA non-coding CI01000004 null 6425355 ~ 6441502 (+)