fbxl7 (fbxl7,LOC107718179,LOC107689422,LOC107688519,LOC107589836,LOC107722558,LOC107585539)


Basic Information

Item Value
gene id fbxl7
gene name fbxl7,LOC107718179,LOC107689422,LOC107688519,LOC107589836,LOC107722558,LOC107585539
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10392682 ~ 10421475 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU16351
ggacggcttgggggtgagtaaagtGTGGGGTAATTTTAGCTTTtgggcaaactattcctttaacttttttttttatccatttatttatatttttattcacttatatatttttgattactCATCTTGTTTATGGCAGGTTGTATTACGTGTAACATGTACATTTCAATTTGTTGGCGTGTAAAGGATTACATGATGTGACGTTAACCAGAAACTAGACATATTTCCCAGAACTAAGGCGGTCCACGGTTCGTGTTTGTTGATGTTTACATTTGATATCTCTGTTATgaatgttttgctttgtttcatcATGTAAGCCTTGTAATAGCTTGGTTTCCATCTTGGTTTCATTGACCAGGAATATTTCAAACAGTGCCATTTTGCTGTGACGTTCACCTTTGTAATGGTCAATAAGGCTTTTTCAGGTGTTTAACAAATGGAAGACCACAGTGGAATAAAGAGGTCTAAGc
>XM_043259536.1
TATTAGGTCAAAGTGCCTGGCGCTCGCGGCAGACGCTCGTGTAGTACTCATGGTAACAGATTCTGCACGAGCGTGTGCGTGCTCCTGACGCAACAAGTATCTGGTTTCCAGTCTCTCCTTTGGATGACTGCGCGCTGTCTGGAGACGAAGAGCTTTTAACGTAAAGAAAAAGCACGGCCAGCACCGCATCCGAAGCGATACCGTTTTAAAGCTGTCGCCCGCGGAACTGCGTTGAGTTTTAACCGATTGCATAATAGTTGCTCAGACTTTTGCCGTTATTTCCACTTTGCTGGTTGCATTACGGGACCGAACCGCATCCGAAAGCGGTCTTTGGCGGATTTTCAGCCCATCTTTTCTTCGGTCGTATGTGTTTTACGCATATGGATACTTTTCCGGAGCGCGGACGGTAGATTATGCATTCCACAGGATGGGTGCGAACAATGGGAAACAGAGCGGGAGTGAAGGGAAAGGCAGTTCCAGTATTTCCTCCGACCTGAGTTCAAGTACAGATCAGACATCAACCAAAGCTCCAAAGAATGCAGCTACCAGTGAAGACTCGGACCTTAGCATGCGAACAGTGAGTACACCAAGTCCGGCTCTGATTTTGCCGCCTCGTTCATCTCCAGGCGTGCTTAATGGCTCCTCCACGTCTTCCTCCACGTTCGGCACGGAAACCATCGCCATGGTCCACACGCCGCCCGCTTCCCTCTCCCATCCGCAAAGGAGCCTGCGACAGCCGAGGGACCAGCAGGGGGCGCCCATCGACATCCTTCCTGACCATGCTTTCTTGCAGATCTTCACCCATCTGCCCACCAACCAGCTGTGTCGGTGCGCCCGTGTCTGCCGCCGCTGGTACAACTTGGCGTGGGACCCGCGCTTATGGAGGACTATTCGTCTGACGGGAGACGTGCTACATGTAGACCGCGCGCTTCGGGTTCTCACTCGCAGACTGTGCCAGGACACCCCGAACGTGTGTCTCACCCTGGAGACGGTGATGGTGAGCGGCTGTCGGAGGTTGACCGATCGAGGACTGTACACTGTGGCTCAGTGCTGCCCGGAACTGCGTCGCTTAGAGGTGGCCGGCTGCTACAACGTGTCCAATGAGGCCGTGTTCGAGGTGGTGTCACGCTGCCCCAACCTGGAACACCTGGATGTTTCAGGGTGCTCTAAGGTGACCTGCATCAGCCTGACGCGGGACGTGTCCGTCAAACTCTCCCCTCTTCACGGGCAGCAGATCTCCATCCGCTATCTTGACATGACGGACTGTTTTGCTCTGGAGGACGAAGGCCTGCACACCATTGCCGCCCACTGCACTCAGCTCACCCACCTCTACCTGCGGCGCTGTGTGCGGCTGACCGACGAGGGCCTGCGCTTCTTAGTCATCTACTGCCCGTCCGTGCGGGAGCTGAGCGTCAGCGACTGCCGCTTCGTCAGTGACTTCGGCCTGCGGGAGATCGCCAAACTCGAGGGCCGCCTGCGCTACCTCAGCATAGCGCACTGCGGCCGCATCACAGACGTGGGCGTGCGTTACGTAGCCAAATACTGCAACAGACTGCGTTACCTGAACGCTCGGGGCTGCGAGGGGTTGACGGACCACGGCATCGAGCACCTCGCCAAGAACTGCCTCAAGCTCAAGTCCCTGGACATCGGGAAGTGCCCGCTGGTGTCGGACGCCGGCCTGGAGCAGCTTGCACTAAACTCCTTCAACCTGAAGAGACTGAGCCTGAAGTCATGCGAGAGCATCTCGGGCCGCGGGCTGCAGGTGGTGGCGGCCAACTGCTTCGACCTTCAGCTGCTGAATGTACAGGACTGTGATGTGCCACTGGAGGCGCTGCGCTTTGTCAAGCGTCACTGCAAACGCTGCGTCATTGAACACACCAATCCAGCCTTTTTCTGAGAGCTGCACAGACTGGGATTGTGTGCTCTTGTGACCCGGGCCGGTGACGTCTCTGCTGGACAACACAGTGGAGATTTGCACTGCTGCACCTCTGTATTTAATTTGCATGGTTGGGAGAaatattaaaggaacagtttccccgaaaatgaaaattaccaaACAATCTACTCAcctccaagccatcctaggtgtatatgactttcttctttcagacgaacacagagtttaaaaaaaaattatcctggctcttccaagcttagtaatgctggtggatagtggcccttattttgaagctctataaattattatatatccAACCCACACATCCCTAGGgatgtcttctgaagcaaatcgatgtgtttttgtaacaaaaaatatttctgtttgtaaaattacaacctaaggcgtataggttagttttacaacAGATATGAGTTGTTATATGAGTTATAgcgcttcaaaataatggtcacCATCCACCGGCATTAACAatcttggaagagccaggataaattttttaaaaactcaatttgtctgaaagaagaaagtcatatacacctaggacggcttgggggtgagtaaagtGTGGGGTAATTTTAGCTTTtgggcaaactattcctttaacttttttttttatccatttatttatatttttattcacttatatatttttgattactCATCTTGTTTATGGCAGGTTGTATTACGTGTAACATGTACATTTCAATTTGTTGGCGTGTAAAGGATTACATGATGTGACGTTAACCAGAAACTAGACATATTTCCCAGAACTAAGGCGGTCCACGGTTCGTGTTTGTTGATGTTTACATTTGATATCTCTGTTATgaatgttttgctttgtttcatcATGTAAGCCTTGTAATAGCTTGGTTTCCATCTTGGTTTCATTGACCAGGAATATTTCAAACAGTGCCATTTTGCTGTGACGTTCACCTTTGTAATGGTCAATAAGGCTTTTTCAGGTGTTTAACAAATGGAAGACCACAGTGGAATAAAGAGGTCTAAGccatattaaacaaaa
>XM_043259542.1
ccccttgtcCCTGCCATTGGGGAGTATCTGTGGGAGGCATCTGGTTTGTTATTCTAAGTTTGTGATGGACAGAAAAAGAATGCCTGGCATTTATCGTAAGATTTGGGAAAGGCAGTTCCAGTATTTCCTCCGACCTGAGTTCAAGTACAGATCAGACATCAACCAAAGCTCCAAAGAATGCAGCTACCAGTGAAGACTCGGACCTTAGCATGCGAACAGTGAGTACACCAAGTCCGGCTCTGATTTTGCCGCCTCGTTCATCTCCAGGCGTGCTTAATGGCTCCTCCACGTCTTCCTCCACGTTCGGCACGGAAACCATCGCCATGGTCCACACGCCGCCCGCTTCCCTCTCCCATCCGCAAAGGAGCCTGCGACAGCCGAGGGACCAGCAGGGGGCGCCCATCGACATCCTTCCTGACCATGCTTTCTTGCAGATCTTCACCCATCTGCCCACCAACCAGCTGTGTCGGTGCGCCCGTGTCTGCCGCCGCTGGTACAACTTGGCGTGGGACCCGCGCTTATGGAGGACTATTCGTCTGACGGGAGACGTGCTACATGTAGACCGCGCGCTTCGGGTTCTCACTCGCAGACTGTGCCAGGACACCCCGAACGTGTGTCTCACCCTGGAGACGGTGATGGTGAGCGGCTGTCGGAGGTTGACCGATCGAGGACTGTACACTGTGGCTCAGTGCTGCCCGGAACTGCGTCGCTTAGAGGTGGCCGGCTGCTACAACGTGTCCAATGAGGCCGTGTTCGAGGTGGTGTCACGCTGCCCCAACCTGGAACACCTGGATGTTTCAGGGTGCTCTAAGGTGACCTGCATCAGCCTGACGCGGGACGTGTCCGTCAAACTCTCCCCTCTTCACGGGCAGCAGATCTCCATCCGCTATCTTGACATGACGGACTGTTTTGCTCTGGAGGACGAAGGCCTGCACACCATTGCCGCCCACTGCACTCAGCTCACCCACCTCTACCTGCGGCGCTGTGTGCGGCTGACCGACGAGGGCCTGCGCTTCTTAGTCATCTACTGCCCGTCCGTGCGGGAGCTGAGCGTCAGCGACTGCCGCTTCGTCAGTGACTTCGGCCTGCGGGAGATCGCCAAACTCGAGGGCCGCCTGCGCTACCTCAGCATAGCGCACTGCGGCCGCATCACAGACGTGGGCGTGCGTTACGTAGCCAAATACTGCAACAGACTGCGTTACCTGAACGCTCGGGGCTGCGAGGGGTTGACGGACCACGGCATCGAGCACCTCGCCAAGAACTGCCTCAAGCTCAAGTCCCTGGACATCGGGAAGTGCCCGCTGGTGTCGGACGCCGGCCTGGAGCAGCTTGCACTAAACTCCTTCAACCTGAAGAGACTGAGCCTGAAGTCATGCGAGAGCATCTCGGGCCGCGGGCTGCAGGTGGTGGCGGCCAACTGCTTCGACCTTCAGCTGCTGAATGTACAGGACTGTGATGTGCCACTGGAGGCGCTGCGCTTTGTCAAGCGTCACTGCAAACGCTGCGTCATTGAACACACCAATCCAGCCTTTTTCTGAGAGCTGCACAGACTGGGATTGTGTGCTCTTGTGACCCGGGCCGGTGACGTCTCTGCTGGACAACACAGTGGAGATTTGCACTGCTGCACCTCTGTATTTAATTTGCATGGTTGGGAGAaatattaaaggaacagtttccccgaaaatgaaaattaccaaACAATCTACTCAcctccaagccatcctaggtgtatatgactttcttctttcagacgaacacagagtttaaaaaaaaattatcctggctcttccaagcttagtaatgctggtggatagtggcccttattttgaagctctataaattattatatatccAACCCACACATCCCTAGGgatgtcttctgaagcaaatcgatgtgtttttgtaacaaaaaatatttctgtttgtaaaattacaacctaaggcgtataggttagttttacaacAGATATGAGTTGTTATATGAGTTATAgcgcttcaaaataatggtcacCATCCACCGGCATTAACAatcttggaagagccaggataaattttttaaaaactcaatttgtctgaaagaagaaagtcatatacacctaggacggcttgggggtgagtaaagtGTGGGGTAATTTTAGCTTTtgggcaaactattcctttaacttttttttttatccatttatttatatttttattcacttatatatttttgattactCATCTTGTTTATGGCAGGTTGTATTACGTGTAACATGTACATTTCAATTTGTTGGCGTGTAAAGGATTACATGATGTGACGTTAACCAGAAACTAGACATATTTCCCAGAACTAAGGCGGTCCACGGTTCGTGTTTGTTGATGTTTACATTTGATATCTCTGTTATgaatgttttgctttgtttcatcATGTAAGCCTTGTAATAGCTTGGTTTCCATCTTGGTTTCATTGACCAGGAATATTTCAAACAGTGCCATTTTGCTGTGACGTTCACCTTTGTAATGGTCAATAAGGCTTTTTCAGGTGTTTAACAAATGGAAGACCACAGTGGAATAAAGAGGTCTAAGccatattaaacaaaa

Function

symbol description
fbxl7 Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and microtubule organizing center. Predicted to be part of SCF ubiquitin ligase complex. Orthologous to human FBXL7 (F-box and leucine rich repeat protein 7).

NR:

description
F-box/LRR-repeat protein 7

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process
GO:0005815 microtubule organizing center cellular_component
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K10273 FBXL7; F-box and leucine-rich repeat protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
TU16351 False 467 lncRNA 0.50 1 10392696 10393162
XM_043259536.1 True 2939 mRNA 0.50 4 10392682 10421475
XM_043259542.1 False 2580 mRNA 0.50 4 10392682 10418137

Neighbor

gene id symbol gene type direction distance location
trnak-cuu_1 NA coding downstream 3059 10389551 ~ 10389623 (-)
hs2st1a hs2st1a,hs2st1,LOC107718112,LOC107589844,LOC107691454,LOC107722647,LOC107585633,LOC106598897 coding downstream 234661 10146582 ~ 10158021 (-)
lrrc8da lrrc8d,lrrc8da,LOC107722644,LOC107585666,LOC107718115,LOC107691468,LOC107589846,LOC107722505 coding downstream 279097 10108131 ~ 10113585 (-)
sept2 sept2,LOC107722571,LOC107693718 coding downstream 321219 10062763 ~ 10071463 (-)
bokb bokb,LOC107693720,LOC107722584 coding downstream 339239 10049401 ~ 10053443 (-)
LOC122359424 mplkip,LOC107722562,LOC107585495,LOC107688429,LOC107718104,LOC107689394,LOC107589834 coding upstream 8319 10429794 ~ 10433121 (-)
inhbab inhbab,LOC107718177,LOC107589832 coding upstream 43834 10465309 ~ 10476229 (-)
afg3l2 afg3l2,LOC107589831,LOC107689395,LOC107688430,LOC107585478,LOC108435493 coding upstream 60195 10481670 ~ 10489280 (-)
ctdsplb ctdsplb,LOC107722544,LOC107688434,LOC107585460,LOC107589830,LOC107689397,LOC108435491,LOC108280637 coding upstream 85848 10507323 ~ 10520967 (-)
zbtb47a LOC107722502,LOC107688435,LOC107718174,LOC107689427,LOC107589829,LOC107586677 coding upstream 113661 10535136 ~ 10541375 (-)
G10987 NA non-coding downstream 165826 10226218 ~ 10226856 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding downstream 232618 10158578 ~ 10160064 (-)
G10812 NA non-coding downstream 345309 10046818 ~ 10047373 (-)
G10773 NA non-coding downstream 464845 9926105 ~ 9927837 (-)
G10708 NA non-coding downstream 643942 9748387 ~ 9748740 (-)
G11057 NA non-coding upstream 245002 10666477 ~ 10666712 (-)
G11064 rpp40,LOC107722637,LOC107688445,LOC107689405 non-coding upstream 246167 10667642 ~ 10668967 (-)
G11063 rpp40,LOC107688445,LOC107722637,LOC107689405 non-coding upstream 247587 10669062 ~ 10669414 (-)
G11097 NA non-coding upstream 324560 10746035 ~ 10817620 (-)
G11096 LOC107688453,LOC107585269,LOC107722575 non-coding upstream 325066 10746541 ~ 10819202 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other downstream 14471 10376063 ~ 10378211 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other downstream 72279 10314033 ~ 10320403 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other downstream 248973 10140935 ~ 10143709 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other downstream 253097 10119973 ~ 10139585 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other downstream 296825 10080182 ~ 10095857 (-)
G11102 tgfbr1a,LOC107585257,LOC107722631,LOC107688454,LOC107689415,LOC107718081 other upstream 336553 10758028 ~ 10764891 (-)
LOC122359216 tgfbr1a,LOC107688454,LOC107585257,LOC107722631,LOC107589809,LOC107718081,LOC107689415 other upstream 346499 10767974 ~ 10861595 (-)
G11105 LOC107688455,LOC107585244,LOC107722600 other upstream 379241 10800716 ~ 10803288 (-)
LOC122359462 NA other upstream 476074 10897549 ~ 10902625 (-)
trnau1apb LOC107688461,LOC107585172,LOC107722553,LOC107680226,LOC107589802,LOC107718075,LOC102202587 other upstream 914243 11335718 ~ 11339611 (-)

Expression


Co-expression Network