LOC122359462


Basic Information

Item Value
gene id LOC122359462
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10897549 ~ 10902625 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU16507
ACGTAGGCCGGCTGGAGCTCGAGGTGTTTATTGTTCCTTCCCGTCGAAGAGAGAAAAGGGCTGGCTTTACGGAGGCATATATCACACACATTTTCCCTGCGGTTTTAGCTTCAAGGAGCCATTTTAGTAAGGCCGAGACAGGTTAATACGGGACCGGTTGGCCATGGCGTACGCGTATCTCTTCAAATACATCATAATCGGAGACACGGGTGTGGGGAAGTCGTGCctattattacagtttacagATAAGCGCTTTCAGCCAGTGCATGATCTCACCATCGGTGTTGAATTCGGAGCGAGAATGATAACTATAGATGGCAAACAGATAAAACTTCAGATCTGGGATACGGTAAGATTAAAATCGTctgattctttttatttttggtggaCCTTTATTTGTGCTTTGATTTCTGTGGTTGAGGTCGGCCAGCCCTTAATAAATGATGCAAGTGTCACTATGGCTGATATGTGAACCTAACACAGTTAGAGACAGTGTTGTGGGAATCTGCATTTCCTGATTACTTAGATCTGGCCGTGCAAAAATGCTAATGCAGCAATACGACTGAGGCTGCTCGTGGGAGTTCAATTCCGCTGCCAGGTCGCTTTGAGCCGGTCACATGACATCGAACCTAAATGTCACGTGATTTATGACTCTAGAGACACAGGAAAATGATGCCATGACAATGCCACCTAAACAAAGTCCTGTTCAGTTTATTGGTAACTATAATGGACCGATTTCAACAAGTGCTCTC
>XM_043259774.1
CACACAGCGGTTAGGTGACTGAACTTCCGGTGAAGTCCACAGCCTCCTCTGTTCTGCGTGCGTGGCGAAGGCGGGACGCGTGACGTAGGCCGGCTGGAGCTCGAGGTGTTTATTGTTCCTTCCCGTCGAAGAGAGAAAAGGGCTGGCTTTACGGAGGCATATATCACACACATTTTCCCTGCGGTTTTAGCTTCAAGGAGCCATTTTAGTAAGGCCGAGACAGGTTAATACGGGACCGGTTGGCCATGGCGTACGCGTATCTCTTCAAATACATCATAATCGGAGACACGGGTGTGGGGAAGTCGTGCctattattacagtttacagATAAGCGCTTTCAGCCAGTGCATGATCTCACCATCGGTGTTGAATTCGGAGCGAGAATGATAACTATAGATGGCAAACAGATAAAACTTCAGATCTGGGATACGGTAAGATTAAAATCGTctgattctttttatttttggtggaCCTTTATTTGTGCTTTGATTTCTGTGGTTGAGGTCGGCCAGCCCTTAATAAATGATGCAAGTGTCACTATGGCTGATATGTGAACCTAACACAGTTAGAGACAGTGTTGTGGGAATCTGCATTTCCTGATTACTTAGATCTGGCCGTGCAAAAATGCTAATGCAGCAATACGACTGAGGCTGCTCGTGGGAGTTCAATTCCGCTGCCAGGTCGCTTTGAGCCGGTCACATGACATCGAACCTAAATGTCACGTGATTTATGACTCTAGAGACACAGGAAAATGATGCCATGACAATGCCACCTAAACAAAGTCCTGTTCAGTTTATTGGTAACTATAATGGACCGATTTCAACAAGTG

Function

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0015031 protein transport biological_process
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16507 False 752 lncRNA 0.45 3 10897549 10902543
XM_043259774.1 True 829 mRNA 0.46 3 10897554 10902625

Neighbor

gene id symbol gene type direction distance location
col15a1b LOC107585244,LOC107722600,LOC107688455 coding downstream 8276 10864071 ~ 10889273 (-)
xirp1 LOC107722568,LOC107688450,LOC107585289,LOC107689412,LOC107718087,LOC107589818 coding downstream 170703 10710965 ~ 10726846 (-)
cdyl cdyl,LOC107689409,LOC107688447,LOC107722500 coding downstream 212894 10669470 ~ 10684655 (-)
LOC122359387 LOC107688520 coding downstream 232479 10664288 ~ 10665070 (-)
rreb1b rreb1,LOC107722578,LOC107718094,LOC107689404,LOC107589881 coding downstream 241700 10625072 ~ 10655849 (-)
LOC122359349 rabggtb,LOC107584851,LOC107732517,LOC107576861 coding upstream 252637 11155262 ~ 11159313 (-)
slc12a7a LOC107722598,LOC107585218,LOC107589906,LOC107718080,LOC107688522 coding upstream 303819 11206444 ~ 11227249 (-)
myh7 vmhc,LOC107688458,LOC107722552,LOC107589804,LOC107680223 coding upstream 398467 11301092 ~ 11312718 (-)
ano8a LOC107718073,LOC107688459,LOC107589801,LOC107586092,LOC107722556,LOC107680225 coding upstream 438763 11341388 ~ 11350664 (-)
plvapa LOC107688534,LOC107722517,LOC107586083 coding upstream 450808 11353433 ~ 11356400 (-)
G11104 col15a1b,LOC107688455,LOC107585244,LOC107722600 non-coding downstream 14245 10803487 ~ 10883304 (-)
G11101 NA non-coding downstream 68260 10757190 ~ 10829289 (-)
G11103 NA non-coding downstream 69397 10756589 ~ 10828152 (-)
G11096 LOC107688453,LOC107585269,LOC107722575 non-coding downstream 78347 10746541 ~ 10819202 (-)
G11097 NA non-coding downstream 79929 10746035 ~ 10817620 (-)
G11115 NA non-coding upstream 13446 10916071 ~ 10918689 (-)
G11118 NA non-coding upstream 50302 10952927 ~ 10978280 (-)
LOC122359508 NA non-coding upstream 198897 11101522 ~ 11104592 (-)
LOC122359521 LOC107674200,LOC107602529,LOC107729365,LOC107584650,LOC107679329 non-coding upstream 214372 11116997 ~ 11120787 (-)
G11234 NA non-coding upstream 244623 11147248 ~ 11150504 (-)
LOC122359216 tgfbr1a,LOC107688454,LOC107585257,LOC107722631,LOC107589809,LOC107718081,LOC107689415 other downstream 35954 10767974 ~ 10861595 (-)
G11105 LOC107688455,LOC107585244,LOC107722600 other downstream 94261 10800716 ~ 10803288 (-)
G11102 tgfbr1a,LOC107585257,LOC107722631,LOC107688454,LOC107689415,LOC107718081 other downstream 132658 10758028 ~ 10764891 (-)
fbxl7 fbxl7,LOC107718179,LOC107689422,LOC107688519,LOC107589836,LOC107722558,LOC107585539 other downstream 476074 10392682 ~ 10421475 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other downstream 519338 10376063 ~ 10378211 (-)
trnau1apb LOC107688461,LOC107585172,LOC107722553,LOC107680226,LOC107589802,LOC107718075,LOC102202587 other upstream 433093 11335718 ~ 11339611 (-)
kcnn1a LOC107722564,LOC107585128,LOC107718068,LOC107680246,LOC107589798 other upstream 476618 11379243 ~ 11405700 (-)
cnn2 cnn2,LOC107585101,LOC107688471,LOC107709904,LOC107550622,LOC107680261 other upstream 538365 11440990 ~ 11445113 (-)
crsp7 crsp7,LOC107722610,LOC107688472,LOC107550620,LOC107709903,LOC107585090,LOC107680253 other upstream 544464 11447089 ~ 11453203 (-)
G11317 pde4ca,pde4c,LOC107722623,LOC107680260 other upstream 673766 11576391 ~ 11577516 (-)

Expression


Co-expression Network