G339



Basic Information


Item Value
gene id G339
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 639895 ~ 640185 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU412
TCCATTTCCAAGTAGAACCAATCCAAATTTGGGTCAAATATGGACAAACCCAACCATTGGGTTAAAAATTTACGCCTTCCCTATTCAACTTACGGAACGAATGCGGCGCCAGTTCCGTTTTTCCGTAAGTTGAATAGGGAAGGCGTAGGACATTTAGCATAAGCTTTTTGAAGAATACGGAATCGCGTTCTGGTGGAAGCACTTGTGATGTGATCATTTGTGCCTATAAAGCATATATATTTTGATTTTTTTTTAGAAAATGACCGATCATTTCGCTAGATAAGACCCTTA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU412 True 291 lncRNA 0.45 1 639895 640185

Neighbor


gene id symbol gene type direction distance location
CI01000000_00588173_00605818 NA coding upstream 33699 587868 ~ 606196 (+)
CI01000000_00264365_00265448 NA coding upstream 374389 264365 ~ 265506 (+)
CI01000000_00260299_00262433 NA coding upstream 376371 260299 ~ 263524 (+)
CI01000000_00252240_00259416 SPON2B, SPON2 coding upstream 380047 252240 ~ 259848 (+)
CI01000000_00127682_00128077 NA coding upstream 511818 123554 ~ 128077 (+)
CI01000000_00678887_00679319 NA coding downstream 38527 678712 ~ 680447 (+)
CI01000000_00753279_00782484 PPP3CA, PPP3CB coding downstream 113094 753279 ~ 782484 (+)
CI01000000_00814932_00820795 NA coding downstream 174747 814932 ~ 820875 (+)
CI01000000_00825374_00827067 NA coding downstream 185060 825245 ~ 827766 (+)
CI01000000_00948279_00956688 NA coding downstream 308094 948279 ~ 957335 (+)
CI01000000_00639336_00658655 NA non-coding upstream 396 639152 ~ 659048 (+)
G336 NA non-coding upstream 12022 627609 ~ 627873 (+)
G334 NA non-coding upstream 22103 617513 ~ 617792 (+)
G333 NA non-coding upstream 22570 617046 ~ 617325 (+)
G330 NA non-coding upstream 29353 610342 ~ 610542 (+)
G344 NA non-coding downstream 5359 645544 ~ 645774 (+)
G243 NA non-coding downstream 6540 646725 ~ 691607 (+)
G396 NA non-coding downstream 211574 851759 ~ 852279 (+)
G399 NA non-coding downstream 217130 857315 ~ 857515 (+)
G408 NA non-coding downstream 238293 878478 ~ 878769 (+)
G252 NA other upstream 132823 503209 ~ 507072 (+)
G350 NA other downstream 31657 671842 ~ 676937 (+)
G435 NA other downstream 784936 1425121 ~ 1432854 (+)
G579 NA other downstream 1175268 1767917 ~ 1908808 (+)
G2774 NA other downstream 3813593 4453778 ~ 4454232 (+)
G2850 NA other downstream 4085801 4725986 ~ 4726482 (+)

Expression



Co-expression Network