G11246


Basic Information

Item Value
gene id G11246
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11293215 ~ 11300016 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU16689
atttattcatgattaaATATCCACATCACTAGttaacaattaatcacaatgacTTCTTTCataccaaaaaccaaaaaacaaaacaaaaaacaaaacatcttaaatcaGGGGGGAGACATTAAATCCAATTTAGGACTGATGTCTGTAGTCCATTGTTATCAGCATGCTCTTTTGGTGTGTTCTATGGGTAGTACACACATTGTGAGTCCTAACAGACACACTAGGGGGCTCTTTTGCTGCCTAATTCCAGTGCTctatctatttttaaacatgccGATTAGTCTACCAGTTACAGTTAGTCTCATACAGATGTGCGGCATGGATATCCAAACAACATTCAAGGTCTACGTGTCAGGTGCAGTATGTGGGAGGAATCATTGTTCCTGTGGTTACTGATTACCTCTAAACTCTCGACCCACTTTCTGCATCCTGTGTCAGGCTACTTAAGTCATTACCAGAATGCTGTGCCTTTTTTTCACACAGAAGGACATCCTCAGAGTCCTTTGAGTTTATCCATTCTTAGGCAAAATCAATCACACTCCTCCTCCTATTGGTTACATTGTATTTAGTATGTGACCTGTGATGACAAAGAGAAAAAgttacacacataatatatattctttGCTTCCtgaatacaatacattttaaaaacattcttgtTTGCCAGCCCTTTTTATCACAAAAAGGCAGACTCacttaaagaataaaatactgTCTGGAGAAATATTCATAGATGCAAAATCTAACTTTGCTTCTCTATACAACCCAATCAAGAAGTGTTTCCCCCCTGCGGGGTATAAAGTGTGAAACGTGTATTTACAAAACTGCGTTGAGCGGACTGGTGCGGGAGCAGGAGAGTTCTCTTTCAGCCCATTCGCCTTTGCCCCATTGCCTGCCTGCACGGGTGGAGAGATAGCCGGGGGAGACGGGCTTCCCTCGGATTTCTGCTGAACCCCCTCAGCCTGTCATTGCTACCTCCTGGTTCATGGCCTACATTGTCCATTGATCCCACTTTGGCCTTGGCCTTGACGTTAACCTTATGGGATTCAATCTTTACATCACCACCACCTGAGAGAGATGAATCATCATTCAcatgattatttattgtatgcGCTCGCAATGAGACTGCGTTTACAGTAATAggcaatattaaaaatgatccatCGCCTACCTGGCTTGTGCTTTATGTTGTCCTTCGATCCACATTTAGAGGTCACTTTGCTCAAatcaacctttttatttaaaatctgaacCTGCACACCAATAAGAACATTTAAGATACATACTACACATGTAACTCATTGCTGTTCTTAGCATCCAATGTTGTAAGGCTTACTTTAccccaaaattttaattctgttgttaattactcaccttcatgtcgtgccaaacccataagacctttcttcatcttcagaacagaaatttagatattttgatgaaaaccaAGAACTTTCTGACCCTCCAGAGACAGCAATGAAACTAAGGCCCAGAAAGTTAATGAGGACATAGTTAAAATATTCCATGTCATGTCAGTggttcagttttaattttaggaagaataaaacacaaaaataatgactttattgatttatttgatttattttcttccatGTCAGTTTTCGATGCACATTCATAAGAATACTACAACACATGCTGATGACAAAAGGTGTGAAACGTCCATTTCTCTTAGTTTATTGTCTGAATATAGAGTTTCACAAGTTTCACAAGCGTGTGTCAAAGTCAAATAGAAAAGGGATATAACTGTTGAATAGTTGTTGAAaggttgttatttttgttttctttgcactttGTAAAGCTAAGGATGAACATTgctgttttaacaatgtccttaatGGTCTTGAACGTGGTAGTTacgtctatggagggtcagaaagttcttatattttatcacaaatatcttcatttgtgctcCAAACATAAACAGaggtattacagttttaaaacaacatgaagatgAGTAATTCTATACGCTAcacgttttatatattattgtgcAAATATGAAACTCTACACGTACATTTCCTCCACCAGGAACATGCTTGATATTGTCCTTGGAGCCACATCGTGAGGTGACATGGCTGAAGTCTAGCTTTTTGTGGACTATCTGAACCTAAACATAGCACAGAGGAAACATTGTCAAAGGTTATTCTACAGTTACATCTGCAAAACAGACAGAAGCAAACACTATGAGTGTGTCAAACAATGtactactgtaaaataaaagtaaatagtaGCACGATGCCAccgaagataaaaaaaaaaatcatcatgttCATGTCAAGTAGTGTTACATGATCAAGCTATAGTACTTGTTTATTTGCAGCAGTTATTTTAACTCTTGTGTTTGAAGAAGTAGATTCAGATAGTAGATAGTACACAAATAGATAGTAGATGTGGCGACCATATTAGATTCAAATGTTCATTGTCTGTTGTGTTATTTGGTGCAGGATTTATTTGTGTGACTCACATATTTGTTTGGACAGAGTAACAGCAGGCCCGGAACACTATGTCTGACTCAGAGTATGTTTTTCACAGCCTGAAGCTCCCTTTATTGCCTTAATCTCAGGTAATGCTTAAACACTCAAGGGTCTACAGTCTAACTCAGTTTCATTTGACCTGCAGTGACAGACCACTCCAGGAAAAGCAAATGTAATTTGGAGATAACATAGCTTGAAGGCTGTACCAAAAACTGCTGAAtttcctaaaaacaaaaacacgacCATGATGATTCTTTGAGCAGCAAGAAGCACCAGTAGCACTAAAGTCTACTTAGTTATTGACATGCAAGGCACTGTTAAACAATATCCAAGGAAATGCATACATAATAGATAACAGATATAAAGAGACACAATttcttaaaacacaaaactgtcaTTGTGACACAGAAGGAGGCTGTAGGTGATCTTGGGTGtgaaaacacattaattaaaaaaaggttttaaccATATGCCAGTAACAGATGTTATGCAAGACAATATAATAGATGTTCTCAACCTTTTGACTCAAAGGCGATTTTGTCAAATACGATATTCAAAGGTTCATATTCGTATAATAACTGTAAtacattattatcaatattagtattaatacatgtaaataagtTCATTGACCacaattcatttttcaaaaactttatGTTAATCAAAAGAGATAATAGCTACAGATGGAAAgaagtatgtttattattttgtaaataaattttaaatctcGCCCTTTGGAAGTTT

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko05031 Amphetamine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU16689 True 3248 lncRNA 0.36 3 11293215 11300016

Neighbor

gene id symbol gene type direction distance location
slc12a7a LOC107722598,LOC107585218,LOC107589906,LOC107718080,LOC107688522 coding downstream 65966 11206444 ~ 11227249 (-)
LOC122359349 rabggtb,LOC107584851,LOC107732517,LOC107576861 coding downstream 133902 11155262 ~ 11159313 (-)
col15a1b LOC107585244,LOC107722600,LOC107688455 coding downstream 403942 10864071 ~ 10889273 (-)
xirp1 LOC107722568,LOC107688450,LOC107585289,LOC107689412,LOC107718087,LOC107589818 coding downstream 566369 10710965 ~ 10726846 (-)
cdyl cdyl,LOC107689409,LOC107688447,LOC107722500 coding downstream 608560 10669470 ~ 10684655 (-)
myh7 vmhc,LOC107688458,LOC107722552,LOC107589804,LOC107680223 coding upstream 1076 11301092 ~ 11312718 (-)
ano8a LOC107718073,LOC107688459,LOC107589801,LOC107586092,LOC107722556,LOC107680225 coding upstream 41372 11341388 ~ 11350664 (-)
plvapa LOC107688534,LOC107722517,LOC107586083 coding upstream 53417 11353433 ~ 11356400 (-)
zgc:154006 LOC107722587,LOC107688535,LOC107585150,LOC107680250,LOC107718071,LOC107688536,LOC107722589 coding upstream 67554 11367570 ~ 11377879 (-)
insl3 LOC107586604,LOC107722567,LOC107688537,LOC107680263,LOC107589901,LOC107709882 coding upstream 114290 11414306 ~ 11414845 (-)
LOC122359499 LOC107689414,LOC107722600,LOC107585244,LOC107688455 non-coding downstream 122983 11167903 ~ 11170232 (-)
G11237 LOC107722600,LOC107585244,LOC107688455 non-coding downstream 125816 11165967 ~ 11167399 (-)
G11234 NA non-coding downstream 142711 11147248 ~ 11150504 (-)
LOC122359521 LOC107674200,LOC107602529,LOC107729365,LOC107584650,LOC107679329 non-coding downstream 172428 11116997 ~ 11120787 (-)
LOC122359508 NA non-coding downstream 188623 11101522 ~ 11104592 (-)
G11263 NA non-coding upstream 122654 11422670 ~ 11423431 (-)
LOC122328878 NA non-coding upstream 139986 11440002 ~ 11440899 (-)
G11280 NA non-coding upstream 154242 11454258 ~ 11455403 (-)
G11281 NA non-coding upstream 156310 11456326 ~ 11456854 (-)
G11292 pik3r2,LOC107688475,LOC107586063,LOC107722495,LOC107680216,LOC107709897,LOC107550618 non-coding upstream 212612 11512628 ~ 11513282 (-)
LOC122359462 NA other downstream 390590 10897549 ~ 10902625 (-)
LOC122359216 tgfbr1a,LOC107688454,LOC107585257,LOC107722631,LOC107589809,LOC107718081,LOC107689415 other downstream 431620 10767974 ~ 10861595 (-)
G11105 LOC107688455,LOC107585244,LOC107722600 other downstream 489927 10800716 ~ 10803288 (-)
G11102 tgfbr1a,LOC107585257,LOC107722631,LOC107688454,LOC107689415,LOC107718081 other downstream 528324 10758028 ~ 10764891 (-)
fbxl7 fbxl7,LOC107718179,LOC107689422,LOC107688519,LOC107589836,LOC107722558,LOC107585539 other downstream 871740 10392682 ~ 10421475 (-)
trnau1apb LOC107688461,LOC107585172,LOC107722553,LOC107680226,LOC107589802,LOC107718075,LOC102202587 other upstream 35702 11335718 ~ 11339611 (-)
kcnn1a LOC107722564,LOC107585128,LOC107718068,LOC107680246,LOC107589798 other upstream 79227 11379243 ~ 11405700 (-)
cnn2 cnn2,LOC107585101,LOC107688471,LOC107709904,LOC107550622,LOC107680261 other upstream 140974 11440990 ~ 11445113 (-)
crsp7 crsp7,LOC107722610,LOC107688472,LOC107550620,LOC107709903,LOC107585090,LOC107680253 other upstream 147073 11447089 ~ 11453203 (-)
G11317 pde4ca,pde4c,LOC107722623,LOC107680260 other upstream 276375 11576391 ~ 11577516 (-)

Expression


Co-expression Network