G11294


Basic Information

Item Value
gene id G11294
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11524026 ~ 11524229 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU16778
ACCCGCTCGCAGGGCCTCTGATCAGCAGAGGACCAAACACTTGGCCGAGGGTGTGAATGTTGAGGCCGTTGTGCTCGGCGCGCTGGCAGACCTTCTCCAGGTGTCTGAGCAAATAGTGCAGCGTCAGGAGGTTCTGCAGCGGGACCTCAGGCTTCTCCAGCACCTGCAGCAGCTTCTCCCGTCTCCTCGCCGACGGGACGTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16778 True 204 lncRNA 0.39 1 11524026 11524229

Neighbor

gene id symbol gene type direction distance location
LOC122361755 NA coding downstream 47855 11475621 ~ 11476171 (-)
crtc1a NA coding downstream 56530 11458451 ~ 11467496 (-)
si:rp71-39b20.4 si:rp71-39b20.4,LOC107585115,LOC107722566,LOC107688468,LOC107589795,LOC103032005 coding downstream 103292 11417942 ~ 11420734 (-)
insl3 LOC107586604,LOC107722567,LOC107688537,LOC107680263,LOC107589901,LOC107709882 coding downstream 109181 11414306 ~ 11414845 (-)
zgc:154006 LOC107722587,LOC107688535,LOC107585150,LOC107680250,LOC107718071,LOC107688536,LOC107722589 coding downstream 146147 11367570 ~ 11377879 (-)
nck1a nck1a,LOC107688485,LOC107585026,LOC107722651,LOC107709892,LOC107550612,LOC107680266 coding upstream 91594 11615823 ~ 11624104 (-)
slc35g2a slc35g2a,LOC107709891,LOC107550608,LOC107680231,LOC107586575,LOC107688541,LOC107722521 coding upstream 103916 11628145 ~ 11631800 (-)
pccb pccb,LOC107688488,LOC107722577,LOC107709888,LOC107680238,LOC106574468 coding upstream 155684 11679913 ~ 11685059 (-)
nceh1a nceh1a,LOC107709885,LOC107722613,LOC107688490,LOC107584973,LOC107550609,LOC107680241 coding upstream 167322 11691551 ~ 11694478 (-)
ghsra LOC107586567,LOC107722546,LOC107688542,LOC107732507,LOC107550603,LOC107680230 coding upstream 376851 11901080 ~ 11903958 (-)
G11293 NA non-coding downstream 1553 11521991 ~ 11522473 (-)
G11292 pik3r2,LOC107688475,LOC107586063,LOC107722495,LOC107680216,LOC107709897,LOC107550618 non-coding downstream 10744 11512628 ~ 11513282 (-)
G11281 NA non-coding downstream 67172 11456326 ~ 11456854 (-)
G11280 NA non-coding downstream 68623 11454258 ~ 11455403 (-)
LOC122328878 NA non-coding downstream 83127 11440002 ~ 11440899 (-)
G11295 NA non-coding upstream 1638 11525867 ~ 11526352 (-)
G11296 NA non-coding upstream 3022 11527251 ~ 11527621 (-)
G11297 NA non-coding upstream 3714 11527943 ~ 11528343 (-)
G11303 NA non-coding upstream 17478 11541707 ~ 11541957 (-)
G11304 NA non-coding upstream 21529 11545758 ~ 11546268 (-)
crsp7 crsp7,LOC107722610,LOC107688472,LOC107550620,LOC107709903,LOC107585090,LOC107680253 other downstream 70823 11447089 ~ 11453203 (-)
cnn2 cnn2,LOC107585101,LOC107688471,LOC107709904,LOC107550622,LOC107680261 other downstream 78913 11440990 ~ 11445113 (-)
kcnn1a LOC107722564,LOC107585128,LOC107718068,LOC107680246,LOC107589798 other downstream 118326 11379243 ~ 11405700 (-)
trnau1apb LOC107688461,LOC107585172,LOC107722553,LOC107680226,LOC107589802,LOC107718075,LOC102202587 other downstream 184415 11335718 ~ 11339611 (-)
LOC122359462 NA other downstream 621401 10897549 ~ 10902625 (-)
G11317 pde4ca,pde4c,LOC107722623,LOC107680260 other upstream 52162 11576391 ~ 11577516 (-)
hltf hltf,LOC107688483,LOC107722619 other upstream 68212 11592441 ~ 11614938 (-)
xkr4 xkr4,zgc:123035,LOC107728991,LOC107679338,LOC107714844,LOC107674319,LOC106569249 other upstream 1265295 12789524 ~ 12838093 (-)
LOC122323969 cahz,LOC107550722,LOC107755757,LOC107664098,LOC107686019,LOC107585971,LOC107751363,LOC108432254 other upstream 1791000 13315229 ~ 13470263 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other upstream 2029544 13553773 ~ 13564365 (-)

Expression


Co-expression Network