G11425 (slc2a2,LOC107586013,LOC107722632,LOC107680265,LOC107550598)


Basic Information

Item Value
gene id G11425
gene name slc2a2,LOC107586013,LOC107722632,LOC107680265,LOC107550598
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11943133 ~ 12033080 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU16949
ACCCATGAAGTACAGCTTTAATGtaagaatgaaaaaaacccacacacaacaaaaagagTTTCAGCACAGTTTTAAAGGCCTTCCTATGTACTGTATCCACCAGCACTCGAGCTGCAATAAAGTAACTCTTGTTTCCTAACAGTCTTGTATCCAGCAAAGCAAATCATTGCTATAGAAGTTTGTCATCGGAAAGATATACTTCAAAATATGGACATTTTTATAATggcaaaaaacacaaatgtaatacCACTAATGTaactcaaaatgtaataatatatatatatatgcattaacaAATTGTAGGTGATGTTATTTCGtggtttgattttaaaatagtttagaTAATCTTCTTTCAGGTCACTCTCTGAGTTGCACGACACCACCGAATTTCTCAGTATTAAACGAAAAGGACAAAATCACactaataaaacacacttaaaactattattttataatgcctTTAAAATATCTCGAACAGACATAATAttggtaatataataataatgtacaatCATTTAAATCTCAACATCAGTTGCAACAAAGCCAGTGCATGTCTGTATTGTGCACCAACTTTCAGGATTATGCTTTTTGTGTTTAGTTAATCTCTTTACCTGCTCCTAGACCAATTACTTTGAATGTTGAGCTAAGCCGTTGAGCTCTCGGTGTGAAGCTCTGTGGAACATTACAGATCAGTTCTGTCATTACAGGTGAGTTTTGTGACAGCAGTAACATTGTTCATTCCACAGTTTTCAGAAGATACAGCCTCTTTCAGGCGTCTGTAGAGCTCTTGAGCTGCTCCATCTCAGCTTCCTCTTGAGGTTTGGGAGGGGGAGCTCCACGTTTGCGATGGAAAACAGCTGTTATCTCCTCAAAAGTCTTCCCTTTTGTTTCAGGTACACGGAAGTAGATAAAAACAGTGAAGCCGAATAGGAGAACTGCAAAAACGATGAAGACATAGCTCCCACAAAGACCTCTAAATAAGGGAAAAACATGCCAATGATGAAATTACATGTCCAGTTGCAACACCCAGCTAATGCGATGGCTGCTGGACGCGGCCCCTGACTGAAGATCTCTGCCACAATGAACCATGGGATTGGTCCGGGCCCGATCTCAAAAAACGACACGAATAGGAATATGGCTGCCATGCTGAGGTAGCTCATCCACGAGTAAACAT
>TU16950
ACCCATGAAGTACAGCTTTAATGtaagaatgaaaaaaacccacacacaacaaaaagagTTTCAGCACAGTTTTAAAGGCCTTCCTATGTACTGTATCCACCAGCACTCGAGCTGCAATAAAGTAACTCTTGTTTCCTAACAGTCTTGTATCCAGCAAAGCAAATCATTGCTATAGAAGTTTGTCATCGGAAAGATATACTTCAAAATATGGACATTTTTATAATggcaaaaaacacaaatgtaatacCACTAATGTaactcaaaatgtaataatatatatatatatgcattaacaAATTGTAGGTGATGTTATTTCGtggtttgattttaaaatagtttagaTAATCTTCTTTCAGGTCACTCTCTGAGTTGCACGACACCACCGAATTTCTCAGTATTAAACGAAAAGGACAAAATCACactaataaaacacacttaaaactattattttataatgcctTTAAAATATCTCGAACAGACATAATAttggtaatataataataatgtacaatCATTTAAATCTCAACATCAGTTGCAACAAAGCCAGTGCATGTCTGTATTGTGCACCAACTTTCAGGATTATGCTTTTTGTGTTTAGTTAATCTCTTTACCTGCTCCTAGACCAATTACTTTGAATGTTGAGCTAAGCCGTTGAGCTCTCGGTGTGAAGCTCTGTGGAACATTACAGATCAGTTCTGTCATTACAGGTGAGTTTTGTGACAGCAGTAACATTGTTCATTCCACAGTTTTCAGAAGATACAGCCTCTTTCAGGCGTCTGTAGAGCTCTTGAGCTGCTCCATCTCAGCTTCCTCTTGAGGTTTGGGAGGGGGAGCTCCACGTTTGCGATGGAAAACAGCTGTTATCTCCTCAAAAGTCTTCCCTTTTGTTTCAGGTACACGGAAGTAGATAAAAACAGTGAAGCCGAATAGGAGAACTGCAAAAACGATGAAGACATAGCTCacacacacacacatatatata

Function

symbol description
slc2a2 Enables D-glucose transmembrane transporter activity. Acts upstream of or within brain development; glucose import; and liver development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including digestive system; muscle; nervous system; pleuroperitoneal region; and yolk syncytial layer. Human ortholog(s) of this gene implicated in Fanconi syndrome; glycogen storage disease; and type 2 diabetes mellitus. Orthologous to human SLC2A2 (solute carrier family 2 member 2).

NR:

description
PREDICTED: solute carrier family 2, facilitated glucose transporter member 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16949 True 1174 lncRNA 0.34 2 12031828 12033080
TU16950 False 982 lncRNA 0.42 2 11943133 12033080

Neighbor

gene id symbol gene type direction distance location
ghsra LOC107586567,LOC107722546,LOC107688542,LOC107732507,LOC107550603,LOC107680230 coding downstream 39175 11901080 ~ 11903958 (-)
nceh1a nceh1a,LOC107709885,LOC107722613,LOC107688490,LOC107584973,LOC107550609,LOC107680241 coding downstream 248655 11691551 ~ 11694478 (-)
pccb pccb,LOC107688488,LOC107722577,LOC107709888,LOC107680238,LOC106574468 coding downstream 258074 11679913 ~ 11685059 (-)
slc35g2a slc35g2a,LOC107709891,LOC107550608,LOC107680231,LOC107586575,LOC107688541,LOC107722521 coding downstream 311333 11628145 ~ 11631800 (-)
nck1a nck1a,LOC107688485,LOC107585026,LOC107722651,LOC107709892,LOC107550612,LOC107680266 coding downstream 319029 11615823 ~ 11624104 (-)
cldn11a cldn11a,LOC107586547,LOC107732506,LOC107550596 coding upstream 59285 12092365 ~ 12094581 (-)
rabggtb rabggtb,LOC107584851,LOC107732517,LOC107576861 coding upstream 228836 12261916 ~ 12266122 (-)
acadm acadm,LOC107688505,LOC107584839,LOC107674066,LOC107602542 coding upstream 234005 12267085 ~ 12270472 (-)
best4 best4,LOC107729385,LOC107674419,LOC107714835,LOC107602543 coding upstream 249002 12282082 ~ 12286011 (-)
si:ch211-106k21.5 si:ch211-106k21.5,LOC107688547,LOC107729472,LOC107714834,LOC107674086,LOC107602518 coding upstream 254345 12287425 ~ 12292955 (-)
G11366 NA non-coding downstream 123334 11817020 ~ 11819799 (-)
G11350 NA non-coding downstream 160732 11780111 ~ 11782401 (-)
LOC122361822 NA non-coding downstream 289281 11650743 ~ 11653852 (-)
G11231 LOC107584999,LOC107722527,LOC107688540,LOC107680245,LOC107550594,LOC107709880 non-coding downstream 342154 11596111 ~ 11600979 (-)
G11321 NA non-coding downstream 355048 11587115 ~ 11588085 (-)
G11429 NA non-coding upstream 1929 12035009 ~ 12036429 (-)
G11549 NA non-coding upstream 238663 12271743 ~ 12272390 (-)
G11551 LOC107657932,LOC107700454,LOC107585903,LOC105895027,LOC107549844,LOC107743876,LOC107710907,LOC107579213 non-coding upstream 246678 12279758 ~ 12281210 (-)
G11565 NA non-coding upstream 306196 12339276 ~ 12359064 (-)
G11572 NA non-coding upstream 319399 12352479 ~ 12353826 (-)
hltf hltf,LOC107688483,LOC107722619 other downstream 328195 11592441 ~ 11614938 (-)
G11317 pde4ca,pde4c,LOC107722623,LOC107680260 other downstream 365617 11576391 ~ 11577516 (-)
crsp7 crsp7,LOC107722610,LOC107688472,LOC107550620,LOC107709903,LOC107585090,LOC107680253 other downstream 489930 11447089 ~ 11453203 (-)
cnn2 cnn2,LOC107585101,LOC107688471,LOC107709904,LOC107550622,LOC107680261 other downstream 498020 11440990 ~ 11445113 (-)
kcnn1a LOC107722564,LOC107585128,LOC107718068,LOC107680246,LOC107589798 other downstream 537433 11379243 ~ 11405700 (-)
xkr4 xkr4,zgc:123035,LOC107728991,LOC107679338,LOC107714844,LOC107674319,LOC106569249 other upstream 756444 12789524 ~ 12838093 (-)
LOC122323969 cahz,LOC107550722,LOC107755757,LOC107664098,LOC107686019,LOC107585971,LOC107751363,LOC108432254 other upstream 1282149 13315229 ~ 13470263 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other upstream 1520693 13553773 ~ 13564365 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other upstream 2545915 14578995 ~ 14610266 (-)
faim2a faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826 other upstream 3087507 15120587 ~ 15127491 (-)

Expression


Co-expression Network