G11505


Basic Information

Item Value
gene id G11505
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12337667 ~ 12339049 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU17037
aacAAAGCACTTTTTAATTGGTTggtttattaacaatatttagaTGACAAAACCGAGAGGTcgcaaaatatcttcatttacaATGCCTTTACGAAATGTCTCTATGGCAGTTCAGGAAAATGTCCACCCATTGCAGCAGAGAGATCTTGTACTAAAGCATAAATCAAAACGTTATTGTGCAACACATCGTACCTTAAATCACAAGCTGTTATTGATCACACTGAGAAcactcaaaaacaaataagggAAACAAGACGACTTCATCTCTATAAATGGGCAGCAAACTAAAAAACTCCGATCCTACAGACCTTTCAATCTCATATGTAATGCCTTTAAAGTGCCAAAACATCAACAGAATATATTCCCCACAGTACACActtctcaaattaaaaaaaaaaagaggagaacCTAGAAACCCATAGTCAATGCGTTTGAAGTGATAACCACACCTTTAAAAGAGAAAACCAAAAGCTCTATCAATTTCTTTGGATGTTAGACTGGTTAAATGTTAGACTGATCCAGATTGACCTTTGATGGAAGAGGTCCAGCTTCCTGCTCCTCCACTCCTGGAGATCTGATGATCACCAGAGAAGACTGCAGATATGGGGTCAGTTTCTGATCCTTCATGTACTCCATATCCCCATATATACTTAGCTTTCAGCAGGGACGTACTGCTCAACAGCAGTGGAGACTGTGGCACAACAAATCCAGATGAGAACCAAGACAGACAGAACTAGAGTGGTGGTCAGGATCCAGCCAGGCAGCCACGGGTTCCtactaatgcaaaaaaaaaaaaacaatattcaacAAGATCAACAGATGCAACAAATCTTTAGAGATTACGATTCAGATCAACGTGTGACCGACCTTGAGAGACAGCTGAAGAGGTTGTAATCGTCCTCAGAGTTGCTTCGATCGATGAAcatgtctctgtctctttcctGAATGTAGCTTCTTGGGTAGTCTTTATAAATAGGGTTTTTCATTTCCTGATCTACAACTATTAATAACACAAGAGGTGCAATATCAGCGCTGAGATCTTGAAACTATTTATGTTAAGAGAATGATGCTATGATAATGtagattaaaagtgacagttaaaTCAGCCTTTATTAATCAATCATGACTGTTATTACATATTTAGACTTCTGAAAACTACACTATGTCATTTTTGTGCCACTATAGCCACAAAACAagtttctcaaaataaaaaggtaGTCCTGGCTTAAAAGAGGACCAGTTAGTTgagcaaatattatatttggcAGCCAAAGTTAGA

Function

GO: NA

KEGG:

id description
ko04138 Autophagy - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU17037 True 1279 lncRNA 0.41 2 12337667 12339049

Neighbor

gene id symbol gene type direction distance location
lrrc42 LOC107729432,LOC107586495,LOC107602539,LOC107688527,LOC107682545 coding upstream 741 12333787 ~ 12336926 (+)
LOC122328950 NA coding upstream 56163 12281372 ~ 12281504 (+)
rps8a rps8a,rps8,LOC107674081,LOC107688507,LOC107602544 coding upstream 56460 12278732 ~ 12281207 (+)
LOC122328989 NA coding upstream 57008 12280590 ~ 12280659 (+)
LOC122328992 NA coding upstream 57653 12279911 ~ 12280014 (+)
ttpa ttpa,LOC107688513,LOC107729218,LOC107584770,LOC107674130,LOC107602535 coding downstream 16839 12355888 ~ 12359062 (+)
asph asph,LOC107729161,LOC107584723,LOC107688512,LOC107714857,LOC107602531 coding downstream 22671 12361720 ~ 12376736 (+)
LOC122360148 LOC108278063 coding downstream 30700 12369749 ~ 12371452 (+)
impa1 impa1,impa1.3,LOC107688552,LOC107586492,LOC107602533,LOC107729422,LOC107714831,LOC107674158 coding downstream 37908 12376957 ~ 12380610 (+)
cdh7a cdh7,LOC107584702,LOC107602530,LOC108432272 coding downstream 149164 12488213 ~ 12541573 (+)
G11419 NA non-coding upstream 236541 12100875 ~ 12101126 (+)
G11207 LOC107688485,LOC107585026,LOC107550612,LOC107709892,LOC107722651 non-coding upstream 718804 11614241 ~ 11618863 (+)
LOC122328936 NA non-coding upstream 724101 11609251 ~ 11613566 (+)
G11191 NA non-coding upstream 880803 11456326 ~ 11456864 (+)
G11190 NA non-coding upstream 882259 11454258 ~ 11455408 (+)
G11590 NA non-coding downstream 206304 12545353 ~ 12545592 (+)
G11593 NA non-coding downstream 275326 12614375 ~ 12614596 (+)
G11595 dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195 non-coding downstream 276946 12615995 ~ 12621414 (+)
G11618 NA non-coding downstream 358037 12697086 ~ 12697294 (+)
G11622 NA non-coding downstream 406763 12745812 ~ 12759891 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 400077 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 829963 11482104 ~ 11507704 (+)
rps28 NA other upstream 893096 11422090 ~ 11444571 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other upstream 996556 11339735 ~ 11341111 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other upstream 999198 11303678 ~ 11338469 (+)
LOC122358236 NA other downstream 284774 12623823 ~ 12626387 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other downstream 528880 12867929 ~ 12874008 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other downstream 1836315 14175364 ~ 14179615 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 2407058 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 2437273 14776322 ~ 14782977 (+)

Expression


Co-expression Network