G11622


Basic Information

Item Value
gene id G11622
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12745812 ~ 12759891 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU17212
TTTGTCTTAAAAGGATCACTCTTTATTTCGCGTCGTATAAAACATCCATTGATATGTACACACATTCTCGGAGGTTCATTAGCGTCAGTCACAATTCCAGTGAAGACAGTCTCAGCCCAGATGTTACTATGGTACTGCGTTAAAAACAAACCCATACAGCGCTTGGGATTTAATCAGATTTGATCCTTCTTCACTTATTCCACATTCTTCAGTGATCGTACAGTGCATCGGAACTAATGAAAGCACATCAATCCAACTGAGAAAGACATGTTTCgaatgaaaattatattaaagattAGATGGATTGGTGTGGAGCCATTATAAAAAGTAGGTAAAATAGAAAAGACGGCCTACATAATCACTGAAATGAGTCAGGACCAGCCTTTTGGGTGAATCTCTCAAAAGCCTGTCAGGAAATATCTGGGTCACATTTCACCACAAAATCATTAGGagaatttttctttattttgcatgtaaGATTTTTGCCATATTTTACCCTCAAATTCTCATTCACGTTTTACCACTAAATGATTATTATAgcaatacagtattttttaataaataaacagcataagTCAAGGTGAactatacttatatatatatatatattataattatatattttatatatacacacacacacacacacacacacacacacacacacacacacacactaaggtGACCATGCATGCCATTTTTCCCGGATGCGTCCTTGTCATTGGTTTGaacgcaaacaaagccaaaacctagatattttaaGCAGtacagaaatcctggccaggacatGGCTCTTATggtcagacagacacacacacacacacacacacacacacacacacacacacacacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattata
>TU17214
TTTGTCTTAAAAGGATCACTCTTTATTTCGCGTCGTATAAAACATCCATTGATATGTACACACATTCTCGGAGGTTCATTAGCGTCAGTCACAATTCCAGTGAAGACAGTCTCAGCCCAGATGTTACTATGGTACTGCGTTAAAAACAAACCCATACAGCGCTTGGGATTTAATCAGATTTGATCCTTCTTCACTTATTCCACATTCTTCAGTGATCGTACAGTGCATCGGAACTAATGAAAGCACATCAATCCAACTGAGAAAGACATGTTTCgaatgaaaattatattaaagattAGATGGATTGGTGTGGAGCCATTATAAAAAGTAGGTAAAATAGAAAAGACGGCCTACATAATCACTGAAATGAGTCAGGACCAGCCTTTTGGGTGAATCTCTCAAAAGCCTGTCAGGAAATATCTGGGTCACATTTCACCACAAAATCATTAGGagaatttttctttattttgcatgtaaGATTTTTGCCATATTTTACCCTCAAATTCTCATTCACGTTTTACCACTAAATGATTATTATAgcaatacagtattttttaataaataaacagcataagTCAAGGTGAactatacttatatatatatatatattataattatatattttatatatacacacacacacacacacacacacacacacacacacacacacacactaaggtGACCATGCATGCCATTTTTCCCGGATGCGTCCTTGTCATTGGTTTGaacgcaaacaaagccaaaacctagatattttaaGCAGtacagaaatcctggccaggacatGGCTCTTATggtcagacagacacacacacacacacacacacacacacacacacacacacacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattata

Function

GO:

id name namespace
GO:0004418 hydroxymethylbilane synthase activity molecular_function

KEGG:

id description
ko00860 Porphyrin and chlorophyll metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU17212 True 926 lncRNA 0.30 2 12745812 12759891
TU17214 False 924 lncRNA 0.49 2 12745812 12759891

Neighbor

gene id symbol gene type direction distance location
zswim5 zswim5,LOC107728925,LOC107674240,LOC107602525,LOC107584626,LOC107714849,LOC107679324 coding upstream 5974 12699932 ~ 12739838 (+)
elovl8a elovl8a,LOC107679337,LOC107602526,LOC107714853 coding upstream 81436 12660915 ~ 12664376 (+)
selenop2 LOC107679336,LOC107729074,LOC107674235 coding upstream 85370 12658046 ~ 12660442 (+)
si:ch73-382f3.1 si:ch73-382f3.1,LOC107586484,LOC107729092,LOC107602516,LOC107674450,LOC107714852,LOC107679322 coding upstream 88928 12653878 ~ 12656884 (+)
tesk2 tesk2,LOC107728975,LOC107679327,LOC107602527,LOC107714850,LOC107674209,LOC107585988 coding upstream 95402 12630031 ~ 12650410 (+)
tmem68 tmem68,LOC107674304,LOC107584594,LOC107714846,LOC107602519,LOC107729056,LOC107679320 coding downstream 25237 12785128 ~ 12790107 (+)
buc buc,LOC107679335,LOC107584532,LOC107674330,LOC107567412,LOC107714843,LOC107728998 coding downstream 103974 12863865 ~ 12867056 (+)
mc4r mc4r,LOC107678942,LOC107714827,LOC107729066,LOC107586449 coding downstream 143241 12903132 ~ 12904941 (+)
cdh10a cdh10a,LOC107586427,LOC107667292,LOC107737811,LOC107567403,LOC107678940,LOC107716359,LOC108280231 coding downstream 367520 13127411 ~ 13146799 (+)
cdh12a cdh12a,LOC107716362,LOC107584489,LOC107687149,LOC107657054,LOC107706948,LOC107550696 coding downstream 414252 13174143 ~ 13213126 (+)
G11618 NA non-coding upstream 48518 12697086 ~ 12697294 (+)
G11595 dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195 non-coding upstream 124398 12615995 ~ 12621414 (+)
G11593 NA non-coding upstream 131216 12614375 ~ 12614596 (+)
G11590 NA non-coding upstream 200220 12545353 ~ 12545592 (+)
G11505 NA non-coding upstream 406763 12337667 ~ 12339049 (+)
LOC122362827 NA non-coding downstream 49181 12809072 ~ 12813327 (+)
G11740 NA non-coding downstream 555338 13315229 ~ 13466961 (+)
LOC122362453 NA non-coding downstream 608702 13368593 ~ 13410609 (+)
G11779 NA non-coding downstream 934428 13694319 ~ 13701326 (+)
G11812 NA non-coding downstream 1144677 13904568 ~ 13917191 (+)
LOC122358236 NA other upstream 119425 12623823 ~ 12626387 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 808222 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 1238108 11482104 ~ 11507704 (+)
rps28 NA other upstream 1301241 11422090 ~ 11444571 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other upstream 1404701 11339735 ~ 11341111 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other downstream 108038 12867929 ~ 12874008 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other downstream 1415473 14175364 ~ 14179615 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 1986216 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 2016431 14776322 ~ 14782977 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 2481906 15241797 ~ 15249249 (+)

Expression


Co-expression Network