G11823


Basic Information

Item Value
gene id G11823
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 13994791 ~ 13995373 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU17521
aattcagattttattgcAAAACCATAAAAGGGGCAAACATTTATCACAGTAAAAACATAGCTTTgccttcatttaaaacaacaattacaaaTAACAGTAATTTATTTAGATTCACTGTTACTTTGTTTACAAAACCggtaacaaattatttattaaatcaagtaataaaatacaaacattgaAATATAACATGACTGTACACTAAAATTTAATAAGTAACCTTTAGCGTTGATCCAGAAGAGGGCACGAGCAGTCATATAATATTCATGTCCTTACAAGGACATCATGTGAATTTatATGATTCATAATCCAAGGTTTGAGTCAGCACCCCCGTCAATATGAGCTCAGCAGTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17521 True 355 lncRNA 0.35 2 13994791 13995373

Neighbor

gene id symbol gene type direction distance location
si:ch211-207d6.2 LOC107686022,LOC107584435,LOC107732580,LOC107751360 coding upstream 2467 13939270 ~ 13992324 (+)
ptf1a ptf1a,LOC107732570,LOC107664050,LOC107586418,LOC107686074,LOC107550704,LOC107751373 coding upstream 90541 13902910 ~ 13904250 (+)
dlgap1a dlgap1a,LOC107751362,LOC107584464,LOC107550721 coding upstream 102106 13835218 ~ 13892685 (+)
LOC122326989 NA coding upstream 571628 13411296 ~ 13423163 (+)
cdh18a cdh18,LOC107706951,LOC107686063,LOC107664087,LOC107716360 coding upstream 696646 13259743 ~ 13298145 (+)
htr5aa htr5aa,LOC107550720,LOC107732551,LOC107664052,LOC107686075,LOC107586412,LOC107751372,LOC103047601 coding downstream 13710 14009083 ~ 14015895 (+)
en2b eng2b,LOC107664096,LOC107751371,LOC107686076,LOC107586406,LOC107550717,LOC107732562 coding downstream 40143 14035516 ~ 14039174 (+)
rbm33b LOC107686025,LOC107751368,LOC107585941 coding downstream 56380 14051753 ~ 14075443 (+)
dnajb6a LOC107732567,LOC107584409,LOC107686029,LOC107751357 coding downstream 103977 14099350 ~ 14105505 (+)
kcnb2a kcnb2,LOC107584379,LOC107751354,LOC107686026,LOC107664054,LOC107550713,LOC108435719 coding downstream 122113 14117486 ~ 14136011 (+)
G11812 NA non-coding upstream 77600 13904568 ~ 13917191 (+)
G11779 NA non-coding upstream 293465 13694319 ~ 13701326 (+)
G11740 NA non-coding upstream 527830 13315229 ~ 13466961 (+)
LOC122362453 NA non-coding upstream 584182 13368593 ~ 13410609 (+)
LOC122362827 NA non-coding upstream 1181464 12809072 ~ 12813327 (+)
G11820 NA non-coding downstream 7172 14002545 ~ 14068095 (+)
G11836 NA non-coding downstream 53344 14048717 ~ 14051620 (+)
LOC122357607 NA non-coding downstream 96191 14091564 ~ 14098847 (+)
G11856 jph1b,LOC107686034,LOC107746914,LOC107550709,LOC107584332,LOC107732545,LOC107664083 non-coding downstream 112782 14108155 ~ 14166955 (+)
G11855 NA non-coding downstream 136386 14131759 ~ 14164377 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other upstream 1120783 12867929 ~ 12874008 (+)
LOC122358236 NA other upstream 1368404 12623823 ~ 12626387 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 2057201 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 2487087 11482104 ~ 11507704 (+)
rps28 NA other upstream 2550220 11422090 ~ 11444571 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other downstream 179991 14175364 ~ 14179615 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 750734 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 780949 14776322 ~ 14782977 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 1246424 15241797 ~ 15249249 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other downstream 1864806 15860179 ~ 15875764 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G735499 NA non-coding NC_048572.1 CM023226.2 65389601 ~ 65390041 (+)