G11898 (LOC106524523,LOC107383785)


Basic Information

Item Value
gene id G11898
gene name LOC106524523,LOC107383785
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14388985 ~ 14437409 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU17635
tggtCATTTTGGGGttgagtaaccctttaaaaaccAAATATCTTCTTATTGGCTGCGATTGTGTCACGTAACCGTAGAGTGTTTAGAGAACACTGTGTGGACAGAAATGTTGCTTGTCTTTTCTTCACACCTGGTTAGAACACAGTATGAGTGTTTGTTGTTGgatttgaatgtatatttaatcATAACCTTTGTTTTCCagaatctggaaaaaaaagtgttttgtaagGACGTGTTTGAGGATATCTCtcaacattacaaaaaaatcttgttttcagTCATAGGCATCATTTGTGGTGGACAAGGTGGGACATGTCCCTTTTATTTTACTCCACACCACAGCTCCAGTTGAACACATTTCAATGCAAACAAACGTGTCCCCGTACCATACatacattcaaaagtttgggatttcttttaattaattaaaaaaacattttatgcttACCAATGTGTTTctatgttattaattattagtagtgttttaaaatgtaacttattccAAAGATTAATAAAGACAACACATGCATGTGAACACATTGGCTTTGAAAGGGTTGGCCTAAAATGCATATTTCCGAGTTCGAAGTCTTGGAACAGctccaaataaaatattgtaatgtcAATTGGGGTAATTACTGAAGCATGATGACAGcttcagttctttttttttatttgtcttactgaccccaaacttttaaacagtagtgtagaTCCACTGGAGTGCCGATGTCATTTTGGTGTAACAAAACGAATTGTGTATGCAGTCAATTTCAGGGGAGTTCATAGTTGTAAGAAATCAAAGCtgtatttgtgatttaattACTGAAAACGTCCTTCCTTTTGTGTACCAACACATTCAATATGTTTTCCAATTGCTTTCAGTAAAAATGGTTTTAGAGTACATTCTTAGGCTTAATGGAAAGATACATTTGTACACTTCAGGAGAGCATATAACCTTGAGATAGAGTACCGCTTTTGATTGGGTTTAGTTAATGCCAACATAAAAGGAATGAATAAACATGACTGTTACATTTTCgtttaacaaaaacactgtaaaattagttttttattctttaataagTACAGTGAATAAGTGAATTCATGAATTTTCGATTAGATGAAACATACTAAAATGATATTATGCTTTTATGAGCTtatgaaataaatcaataatgaatgaatgatatcTAATGAAATACCTTCAAGATGAATTAAATAACTtttgatgtattaaaaaaaaactatttagtttattgtttataaaggTACTATGTCATActagttgttttattatatgtatgaGAGATCAGCAGTGCTTTGGTGTTCTGTTGAATGAGAGCactatatgtgtatgtgtttattcatACACCGGTGTGTagcttttagtttatttagagATCACGTCCAGTCCAGCTTTCATTTTCACTCCCCCCTACAATTCACCTTACAGTAATAGGATGCTGCATTTTGcatgcaatattatattttagccCTAGGGACCTCTGAATTAATGAACGTTGAAAATCGTAAATAGAAGACCTCTCAAAGCGGTTCATGTTTATTAGACCGCTCAGAGTGCACTCCATAAATTTGTTTCATTGTAGCTAAGCTGCGCAGGCtgtgaataaatgttttcaatgaATGTGGAAAAAACGCTCTCTATTATTCTGTGCTGGGAATGACGGTAAATACCAGTTTAATTACGTTGGGTGTTCCATTTTGAATGCGTGTCTTTACATCTGAATTAGCTCTTGTACCAAGCTTAAGCATTGCAGTGCAACTGAGACTGAAATAAATTCAGGGCCACTTTCCTACAGAATTTTAGACGATTGCCCGCCATGAACAAGCCGTCACACTCACACTGGAGTCATATGCCTCCCATCATTGTCCAAGAATACCGCTTTAGATTGCTGCAACAAGAGGCCCAGAATCACagattttttcctttgtttctatctttttttttttttttttttttttttttCTTAATTTTTAAATCGTTTATTACAAAGTGGAAATATCCAGCAACTCCAGGCTACACTGAATAATTcttagaatttatttttcaacatttacatACCAGAACAGCATCCATTCACTTTGAGGTTTACCACAGATTACATGTCTATTTGTTTCATAGTTATGTACAAGTCTACTTAAACTTTAAGAGGAGGTCCAGTAGAGTCAAATGATTTTGACTTGCTGATGAATGTATTCCTTTGCACTAGCCCATGAATGTGGGGAAAAGAAGACAATTAAACATGTTGTAGTGTTACAGTGTAGTTTCATTGGATTCAGTAGTGTTTGGCCTTGTCCTAATCATCCTTATCTTTAGCGCCGTGTTTCAGGATGCGTGTGAATTCTACGTAGTTGAAGTTTCCTTTCTTGTCAATGGGGGCCTCTCTAAACAGCTCGTCTACTTCTTCATCTGTGAACCTGTCTCCCATAGTGGTCAAGAGCTCCCTCAGGTAGTCCTCCTGAATAACCTGTCCCCTCCTCATCAAAACAAGCAAAGGCATTTTTGATAACATCCTCAGGATCTGTTCCATTAAGCTTCTCTCCAAACATTGTGAGGAACATGGTGAAGTTAATGGGACCTGGAGCTTCATTCATCATCGCTTCGAGGTATTCATCTGTGGGGTTCTTACCTAACAATGAAATAACCTGTCAGTCGAATACAGTTcgttttttgattaaatgtagcTTTTTCAGAGACTACGCCAA

Function

NR:

description
PREDICTED: myosin regulatory light polypeptide 9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17635 True 2724 lncRNA 0.45 3 14388985 14437409

Neighbor

gene id symbol gene type direction distance location
tcea1 tcea1,LOC107746907,LOC107664035,LOC107558928,LOC107732572,LOC107686041,LOC107584254 coding upstream 20895 14363921 ~ 14368090 (+)
si:dkey-94e7.2 si:dkey-94e7.2,LOC107686084,LOC107586344,LOC107732574,LOC107746919,LOC108440665,LOC108268141 coding upstream 37413 14348581 ~ 14351572 (+)
ankrd33bb ankrd33bb,LOC107550706,LOC107732577,LOC107686083,LOC107664029 coding upstream 115365 14262564 ~ 14273620 (+)
march6 march6,LOC107746911,LOC107686038,LOC107732575,LOC107664076 coding upstream 126571 14245255 ~ 14262414 (+)
atpsckmt fam173b,LOC107664046,LOC107746922,LOC107550697,LOC107686036,LOC107732578 coding upstream 144041 14242673 ~ 14244944 (+)
myom1a myom1a,LOC107686045,LOC107732591,LOC107664077,LOC107746915 coding downstream 2343 14439752 ~ 14461713 (+)
lpin2 lpin2,lipin2,LOC107686047,LOC107584234,LOC107664080 coding downstream 24504 14461913 ~ 14480848 (+)
yes1 yes1,LOC107713975,LOC107584194,LOC107686048,LOC107751567,LOC108437224 coding downstream 172345 14609754 ~ 14635684 (+)
colec12 colec12,LOC107686068,LOC107751569 coding downstream 206095 14643504 ~ 14668425 (+)
stam stam,LOC107664071,LOC107556673,LOC107686052 coding downstream 231993 14669402 ~ 14677307 (+)
G11895 rgs20,LOC107584260,LOC107746905 non-coding upstream 13235 14371918 ~ 14375750 (+)
G11894 NA non-coding upstream 17151 14369688 ~ 14371834 (+)
G11832 rpl7,LOC107664057,LOC107584398,LOC107686030,LOC107550715 non-coding upstream 203199 14136114 ~ 14185786 (+)
G11856 jph1b,LOC107686034,LOC107746914,LOC107550709,LOC107584332,LOC107732545,LOC107664083 non-coding upstream 222030 14108155 ~ 14166955 (+)
G11855 NA non-coding upstream 224608 14131759 ~ 14164377 (+)
LOC122355240 NA non-coding downstream 58041 14495450 ~ 14497873 (+)
G11914 NA non-coding downstream 122451 14559860 ~ 14603545 (+)
G11917 NA non-coding downstream 199035 14636444 ~ 14636769 (+)
G11918 LOC107664027,LOC107713977,LOC107584165,LOC107556660 non-coding downstream 200180 14637589 ~ 14637805 (+)
G12135 fam134b,LOC107686060,LOC107664066,LOC107584095,LOC107751562,LOC107558208,LOC107713983 non-coding downstream 385752 14823161 ~ 14826945 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other upstream 209370 14175364 ~ 14179615 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other upstream 1514977 12867929 ~ 12874008 (+)
LOC122358236 NA other upstream 1762598 12623823 ~ 12626387 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 2451395 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 2881281 11482104 ~ 11507704 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 308698 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 338913 14776322 ~ 14782977 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 804388 15241797 ~ 15249249 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other downstream 1422770 15860179 ~ 15875764 (+)
G12531 LOC107722077,LOC107568983 other downstream 1829634 16267043 ~ 16268797 (+)

Expression


Co-expression Network