G11917


Basic Information

Item Value
gene id G11917
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14636444 ~ 14636769 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU17660
CTTTTTTGATACAAAAGGATTTCATGGGCCACATATTTTGTCTATGtagctatatattttatttagaagccCAGAAGAGCAAAAGTATGCAGTCTGGTACATCTGTTGTTAAGTGGACAAAAGGGAAGATACATTTTTGATCtgtgtaatgtaaatgtaaatcagtTAGACTAACAAATTCATAGCATAGAAGTATCTGTTATCTTCTAATAGTATGGTTTCAAGATatgtatatacttatttttatgatCAGTGCtctgttattttaacatttttattacattcagtttaaaattgtatttaaagaaagaggaggagaaaggtGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17660 True 326 lncRNA 0.29 1 14636444 14636769

Neighbor

gene id symbol gene type direction distance location
yes1 yes1,LOC107713975,LOC107584194,LOC107686048,LOC107751567,LOC108437224 coding upstream 760 14609754 ~ 14635684 (+)
lpin2 lpin2,lipin2,LOC107686047,LOC107584234,LOC107664080 coding upstream 155596 14461913 ~ 14480848 (+)
myom1a myom1a,LOC107686045,LOC107732591,LOC107664077,LOC107746915 coding upstream 174731 14439752 ~ 14461713 (+)
bag1 bag1,LOC107746903,LOC107556611,LOC107732557,LOC107664079 coding upstream 200067 14433128 ~ 14436377 (+)
chmp5a chmp5,LOC107732555,LOC107664100,LOC107558945,LOC107586329,LOC107686086,LOC107746917,LOC108440659 coding upstream 203851 14428931 ~ 14432593 (+)
colec12 colec12,LOC107686068,LOC107751569 coding downstream 6735 14643504 ~ 14668425 (+)
stam stam,LOC107664071,LOC107556673,LOC107686052 coding downstream 32633 14669402 ~ 14677307 (+)
tmem236 tmem236,si:dkey-32m20.1,LOC107713979,LOC107686088,LOC107751554,LOC107664072 coding downstream 41680 14678449 ~ 14681332 (+)
cacnb2b LOC107664070,LOC107751551,LOC107686054 coding downstream 46121 14682890 ~ 14709199 (+)
si:ch211-106h4.4 malrd1,LOC107713964,LOC107686070 coding downstream 89391 14726160 ~ 14745958 (+)
G11914 NA non-coding upstream 32899 14559860 ~ 14603545 (+)
LOC122355240 NA non-coding upstream 138571 14495450 ~ 14497873 (+)
G11898 LOC106524523,LOC107383785 non-coding upstream 199035 14388985 ~ 14437409 (+)
G11895 rgs20,LOC107584260,LOC107746905 non-coding upstream 260694 14371918 ~ 14375750 (+)
G11894 NA non-coding upstream 264610 14369688 ~ 14371834 (+)
G11918 LOC107664027,LOC107713977,LOC107584165,LOC107556660 non-coding downstream 820 14637589 ~ 14637805 (+)
G12135 fam134b,LOC107686060,LOC107664066,LOC107584095,LOC107751562,LOC107558208,LOC107713983 non-coding downstream 186392 14823161 ~ 14826945 (+)
G12136 NA non-coding downstream 190282 14827051 ~ 14829486 (+)
G12143 NA non-coding downstream 220603 14857372 ~ 14886069 (+)
G12144 NA non-coding downstream 229429 14866198 ~ 14878772 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other upstream 456829 14175364 ~ 14179615 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other upstream 1762436 12867929 ~ 12874008 (+)
LOC122358236 NA other upstream 2010057 12623823 ~ 12626387 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 2698854 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 3128740 11482104 ~ 11507704 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 109338 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 139553 14776322 ~ 14782977 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 605028 15241797 ~ 15249249 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other downstream 1223410 15860179 ~ 15875764 (+)
G12531 LOC107722077,LOC107568983 other downstream 1630274 16267043 ~ 16268797 (+)

Expression


Co-expression Network