G12082


Basic Information

Item Value
gene id G12082
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14691177 ~ 14699019 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU17885
taaaattgttaattaatattgcaACTTTTTCTATCTTTAAAAAATCAATCATCTAAGTTtccatatataaacatactgcctgagtaataataaataataaataaatcatacaatGATAAGCAACTGCTTTGTTCTATTAATTTGTTGTATTATAAAtgagtatttaattaaaagaaagtcAAATGTCAACGCAATGTCAGTCTAGCTGCTTGTAGCCTGGTTTTTAAAAGGCGATGCTCTGTGGGAGACGGTGGACTGAAGCAGGACGTGATGCTGTCTGCTCAGTACCTTAATTAAAAAGGACCTCGGGGAGCTCACTGACACAGACAGGGGggtttcattcagtttttaaagTCGAGCAATACTGGACTCTGTAAAGAGCCGATAATAAAACACAGAGCATTTGTTGTTGCTCATTCATGGTTTGCCACGGTGCTTCTTATCTGTTTTTGGACTGTGCAaagtaacagaaaaaaagattgtgTGTAAAGCATTGATTTTGTAGAGTTCAAGATTTATCACCGATGTACTGTTTCAACCAAGACATTTGGTAATTAGCTTTTTGACACGGCTACCTTGTTACTTTGACGGGGGAAAAAGAGCCGTGCAAAATTTATGAGCACATCTAAAGCTGTGATGCATTTCGGTCCTTGTGGCCAACGTCACTGGTAGCAGGAATGGGAAGCTGAGAGAATTATGGGGTTGCAATCTACCTTGGCCTTCTCAAGCTGGACTTGGGcattcttctccttctcctcagTGGCCCCTGAGTCCTGACGGTCCGCCGAACCCTTTTCTTGGGTGGCATGCCCACTTGCTCGCTTTCCTTTGCGTTTCTCCACGATTAACAGCTTAAGTAGTGGTCAATTTTATGCTCTCACAGCCGAGATTGACCAGCGACTGAGAAATATCCATGTACTATCCCCTTTAATCTGTTCCGTCCCAGGACAGCCAGCCAACTTTGTCAGATGAGCCCTAAGCAGGTTTTACGGCATGTTTTGCGCATGGTGAAAATCATAAAGTCGCGAGCTTCGGGCTTCTTTGATAGTTATCGCAAACAGTGAGCGCCGAAAGTCTCTCCATGAGTGGATACACAAGCGGTGTGAGCAGCTCTCGCTGTGAGTGGAGTTTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17885 True 1135 lncRNA 0.52 2 14691177 14699019

Neighbor

gene id symbol gene type direction distance location
clul1 LOC107664027,LOC107584165,LOC107556660,LOC107713977,LOC107686051 coding downstream 50013 14635744 ~ 14641164 (-)
emilin2a LOC107746901,LOC107686046,LOC107584212,LOC107751548,LOC107664089,LOC107558120 coding downstream 197411 14480181 ~ 14493766 (-)
myl12.2 myl12.2,LOC107732590,LOC107746904,LOC103037289,LOC108436131 coding downstream 252177 14436561 ~ 14439000 (-)
rgs20 rgs20,LOC107584260,LOC107686043,LOC107746905,LOC107664043,LOC107556579 coding downstream 311442 14370926 ~ 14379735 (-)
LOC122356353 LOC107746908,LOC107686040,LOC107584282,LOC107556566,LOC107664028,LOC107732544 coding downstream 330817 14353332 ~ 14360360 (-)
mrc1b mrc1,LOC107713970,LOC107686053,LOC107664090,LOC107751555,LOC107556679 coding upstream 10513 14709532 ~ 14721348 (-)
myripa LOC107686056,LOC107584120,LOC107713972 coding upstream 54321 14753340 ~ 14772259 (-)
e2f5 e2f5,LOC107686091,LOC107713982,LOC107584115,LOC107558188,LOC107664024,LOC107751573 coding upstream 80282 14779301 ~ 14786610 (-)
lrrcc1 lrrcc1,LOC107713973,LOC107686059,LOC107584102,LOC107751561,LOC107556739,LOC107664063 coding upstream 87961 14786980 ~ 14796187 (-)
ralyl LOC107586268,LOC107686092,LOC107713968 coding upstream 97371 14796390 ~ 14812356 (-)
G12062 NA non-coding downstream 22638 14667733 ~ 14668539 (-)
G12034 NA non-coding downstream 231850 14456553 ~ 14459327 (-)
G12027 NA non-coding downstream 250390 14439743 ~ 14440787 (-)
G12024 NA non-coding downstream 261123 14428911 ~ 14430054 (-)
G11982 NA non-coding downstream 440637 14249003 ~ 14250540 (-)
G12083 NA non-coding upstream 734 14699753 ~ 14700378 (-)
G12084 cacnb2b,LOC107751551,LOC107664070,LOC107713974 non-coding upstream 2289 14701308 ~ 14703493 (-)
G12085 NA non-coding upstream 4618 14703637 ~ 14704458 (-)
G12159 NA non-coding upstream 73471 14772490 ~ 14849433 (-)
G12161 NA non-coding upstream 74734 14773753 ~ 14775491 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other downstream 80911 14578995 ~ 14610266 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other downstream 1126812 13553773 ~ 13564365 (-)
LOC122323969 cahz,LOC107550722,LOC107755757,LOC107664098,LOC107686019,LOC107585971,LOC107751363,LOC108432254 other downstream 1220914 13315229 ~ 13470263 (-)
xkr4 xkr4,zgc:123035,LOC107728991,LOC107679338,LOC107714844,LOC107674319,LOC106569249 other downstream 1853084 12789524 ~ 12838093 (-)
hltf hltf,LOC107688483,LOC107722619 other downstream 3076239 11592441 ~ 11614938 (-)
faim2a faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826 other upstream 421568 15120587 ~ 15127491 (-)
smarcd3a smarcd3a,smarcd3,LOC107657439,LOC107599876,LOC107709803,LOC107556978,LOC107718026,LOC103039772 other upstream 434952 15133971 ~ 15153989 (-)
ccdc24 ccdc24,LOC107657456,LOC107599905 other upstream 860644 15559663 ~ 15579706 (-)
pappa2 pappa2,LOC107722077,LOC107568983,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other upstream 1525704 16224723 ~ 16268835 (-)
LOC122362257 LOC107658348,LOC107563587,LOC107678922,LOC107726920,LOC107722065,LOC107559085 other upstream 1784141 16483160 ~ 16512019 (-)

Expression


Co-expression Network